Polyploid QTL‐seq towards rapid development of tightly linked DNA markers for potato and sweetpotato breeding through whole‐genome resequencing
H Yamakawa, E Haque, M Tanaka… - Plant Biotechnology …, 2021 - Wiley Online Library
Potato (Solanum tuberosum L.) and sweetpotato (Ipomoea batatas L.), which are
nutritionally and commercially important tuberous crops, possess a perplexing heredity …
nutritionally and commercially important tuberous crops, possess a perplexing heredity …
An SNP-based high-density genetic linkage map for tetraploid potato using specific length amplified fragment sequencing (SLAF-Seq) technology
X Yu, M Zhang, Z Yu, D Yang, J Li, G Wu, J Li - Agronomy, 2020 - mdpi.com
Specific length amplified fragment sequencing (SLAF-seq) is a recently developed high-
resolution strategy for the discovery of large-scale de novo genotyping of single nucleotide …
resolution strategy for the discovery of large-scale de novo genotyping of single nucleotide …
High-density linkage map constructed from a skim sequenced diploid potato population reveals transmission distortion and QTLs for tuber yield and pollen shed
CR Clot, X Wang, J Koopman, AT Navarro, J Bucher… - Potato Research, 2024 - Springer
The reinvention of potato, from a tetraploid clonal crop into a diploid seed-based hybrid crop,
requires insight in the mutational load, recombination landscape, and the genetic basis of …
requires insight in the mutational load, recombination landscape, and the genetic basis of …
A k-mer-based bulked segregant analysis approach to map seed traits in unphased heterozygous potato genomes
P Sonsungsan, ML Nganga… - G3: Genes …, 2024 - academic.oup.com
High-throughput sequencing-based methods for bulked segregant analysis (BSA) allow for
the rapid identification of genetic markers associated with traits of interest. BSA studies have …
the rapid identification of genetic markers associated with traits of interest. BSA studies have …
Validation of genotyping by sequencing using transcriptomics for diversity and application of genomic selection in tetraploid potato
Potato is an important food crop due to its increasing consumption, and as a result, there is
demand for varieties with improved production. However, the current status of breeding for …
demand for varieties with improved production. However, the current status of breeding for …
QTL mapping of potato chip color and tuber traits within an autotetraploid family
Cultivated potato (Solanum tuberosum L.) is a highly heterozygous autotetraploid crop
species, and this creates challenges for traditional line development and molecular …
species, and this creates challenges for traditional line development and molecular …
A next-generation sequencing method for genotyping-by-sequencing of highly heterozygous autotetraploid potato
JG Uitdewilligen, AMA Wolters, BB D'hoop, TJA Borm… - PloS one, 2013 - journals.plos.org
Assessment of genomic DNA sequence variation and genotype calling in autotetraploids
implies the ability to distinguish among five possible alternative allele copy number states …
implies the ability to distinguish among five possible alternative allele copy number states …
Genetic mapping in autohexaploid sweet potato with low-coverage NGS-based genotyping data
E Yamamoto, K Shirasawa, T Kimura… - G3: Genes …, 2020 - academic.oup.com
Abstract Next-generation sequencing (NGS)-based genotyping methods can generate
numerous genetic markers in a single experiment and have contributed to plant genetic …
numerous genetic markers in a single experiment and have contributed to plant genetic …
The contribution of the Solanaceae coordinated agricultural project to potato breeding
Potato variety development in the USA involves extensive interaction between public sector
scientists and state and national grower organizations to test and commercialize new …
scientists and state and national grower organizations to test and commercialize new …
[HTML][HTML] Genome sequencing of adapted diploid potato clones
Cultivated potato is a vegetatively propagated crop, and most varieties are autotetraploid
with high levels of heterozygosity. Reducing the ploidy and breeding potato at the diploid …
with high levels of heterozygosity. Reducing the ploidy and breeding potato at the diploid …