Predicting site-binding modes of ions and water to nucleic acids using molecular solvation theory
… molecular solvation theory and topological analysis that predicts cation and water site binding
to nucleic acids. 3D-RISM is shown to accurately capture alkali cations and water binding …
to nucleic acids. 3D-RISM is shown to accurately capture alkali cations and water binding …
Transferable ion force fields in water from a simultaneous optimization of ion solvation and ion–ion interaction
P Loche, P Steinbrunner, S Friedowitz… - The Journal of …, 2021 - ACS Publications
… Figure 2 shows the solvation free energy for the four salts and the four water models. All …
water model has a negligible effect on the solvation free energies. Symbols show the solvation …
water model has a negligible effect on the solvation free energies. Symbols show the solvation …
Ions' motion in water
P Banerjee, B Bagchi - The Journal of chemical physics, 2019 - pubs.aip.org
… this coupling between the solute ion and solvent water. We discuss how ionic mobility in
water and other dipolar solvents are intimately connected to the dipolar solvation dynamics, in …
water and other dipolar solvents are intimately connected to the dipolar solvation dynamics, in …
Dielectric characteristics, electrical conductivity and solvation of ions in electrolyte solutions
VV Shcherbakov, YM Artemkina, IA Akimova… - Materials, 2021 - mdpi.com
… with the processes of ion solvation. Water molecules in the solvation shells of ions lose their
… As a result, the water molecules in the solvation shells of ions reduce their ability to reorient …
… As a result, the water molecules in the solvation shells of ions reduce their ability to reorient …
Solvation structures in aqueous metal‐ion batteries
X Li, X Wang, L Ma, W Huang - Advanced Energy Materials, 2022 - Wiley Online Library
… in solvation structures in metal-ion batteries. First, the design principles of the solvation …
of the solvation structure of metal ions, part of the water molecules will be removed from the …
of the solvation structure of metal ions, part of the water molecules will be removed from the …
Hybrid discrete‐continuum solvation methods
JR Pliego Jr, JM Riveros - Wiley Interdisciplinary Reviews …, 2020 - Wiley Online Library
… This study concluded that addition of one water molecule to the neutral and the ion in the
quantum mechanical calculations greatly improved agreement with experimental results. …
quantum mechanical calculations greatly improved agreement with experimental results. …
Investigation of ions hydration using molecular modeling
J Teychené, H Roux-de Balmann, L Maron… - Journal of Molecular …, 2019 - Elsevier
… of ions in pure water and in presence of counter-ion using a quantum mechanical method,
the Density Functional Theory (… ion and the water molecules, d, the ion solvation enthalpy, H …
the Density Functional Theory (… ion and the water molecules, d, the ion solvation enthalpy, H …
Improving Performance of the SMD Solvation Model: Bondi Radii Improve Predicted Aqueous Solvation Free Energies of Ions and pKa Values of Thiols
… models and the pK a values, is to explicitly include solvent molecules (most commonly,
water) into the calculation along with the implicit solvation model. Such a hybrid model (ie, …
water) into the calculation along with the implicit solvation model. Such a hybrid model (ie, …
Machine learning-guided approach for studying solvation environments
Y Basdogan, MC Groenenboom… - … of chemical theory …, 2019 - ACS Publications
… We initially hypothesized that solvation free energies will improve if we systematically add
explicit water molecules around each ion while ensuring that each microsolvated state is a …
explicit water molecules around each ion while ensuring that each microsolvated state is a …
The behavior of ions in water is controlled by their water affinity
KD Collins - Quarterly reviews of biophysics, 2019 - cambridge.org
… Although estimates vary, we shall assume that the solvation layer constitutes about two-thirds
of the solvent energy of interaction with the solute and the transition layer about one-third. …
of the solvent energy of interaction with the solute and the transition layer about one-third. …
相关搜索
- molecular solvation theory ions and water
- ions in water biological structure
- ions in water molecular dynamics simulation
- dielectric theory ionic fluids
- solvation properties ionic force field optimization
- ion solvation modeling water
- solvation energies of ions
- ion solvation simultaneous optimization
- ions in liquid water
- solvation of ions dielectric characteristics
- anomalous ion diffusion aqueous solvation shells
- solvation structures aqueous metal ion batteries
- water forces solvation parameters
- concentration dependent water diffusivity ionic solutions
- ions in water chemical processes
- molecular solvation theory nucleic acids