An Integrated Transcriptome and Proteome Analysis Reveals Putative Regulators of Adventitious Root Formation in Taxodium 'Zhongshanshan'

Z Wang, J Hua, Y Yin, C Gu, C Yu, Q Shi, J Guo… - International Journal of …, 2019 - mdpi.com
… In our study, EIN3 was up-regulated during primary root formation at both the mRNA and …
promote primary root formation, which would be used to improve horticultural rooting techniques…

Shoot and root single cell sequencing reveals tissue-and daytime-specific transcriptome profiles

F Apelt, E Mavrothalassiti, S Gupta, F Machin… - Plant …, 2022 - academic.oup.com
… for both root and especially above-ground cell types. As the plants’ transcriptome substantially
… on both Arabidopsis root and above-ground tissues at defined times of the day. For the …

Insights into barley root transcriptome under mild drought stress with an emphasis on gene expression regulatory mechanisms

A Janiak, M Kwasniewski, M Sowa… - International Journal of …, 2019 - mdpi.com
… For this reason, we perform a study of root transcriptomes under … Leaf and roots transcritome
profiling of these genotypes … increases lateral root formation and the density of root hairs […

Transcriptome profiles of soybean leaves and roots in response to zinc deficiency

H Zeng, X Zhang, M Ding, X Zhang… - Physiologia …, 2019 - Wiley Online Library
… However, to the best of our knowledge, the transcriptomic responses to Zn … transcriptome
changes in response to Zn deficiency were analyzed by RNA-seq in soybean leaves and roots. …

Comparative transcriptome and metabolome analyses provide new insights into the molecular mechanisms underlying taproot thickening in Panax notoginseng

XJ Li, JL Yang, B Hao, YC Lu, ZL Qian, Y Li, S Ye… - BMC plant biology, 2019 - Springer
… There was a significant difference between March and May, while July and November
clustered together, suggesting that the overall transcriptomic profiles between the seed root and …

Integrated transcriptome and hormonal analysis of naphthalene acetic acid-induced adventitious root formation of tea cuttings (Camellia sinensis)

Y Wang, D Pang, L Ruan, J Liang, Q Zhang, Y Qian… - BMC Plant …, 2022 - Springer
… The formation of adventitious root (AR) determines the … underlying AR formation in nodal
tea cuttings, transcriptome and … Gene expression profiling during adventitious root formation

An integrated analysis of the rice transcriptome and metabolome reveals root growth regulation mechanisms in response to nitrogen availability

W Xin, L Zhang, W Zhang, J Gao, J Yi, X Zhen… - International journal of …, 2019 - mdpi.com
… Although they had no functional annotations, we still consider their specific importance in
rice roots responding to nitrogen availability changes. Transcriptome profiles were confirmed …

Coordinated mechanisms of leaves and roots in response to drought stress underlying full-length transcriptome profiling in Vicia sativa L

X Min, X Lin, B Ndayambaza, Y Wang, W Liu - BMC plant biology, 2020 - Springer
… Analysis of potential DEGs in leaves and roots To further gain insight into the transcriptomic
profiles of the response of common vetch to drought stress, genes in the leaf and root tissues …

A single-cell RNA sequencing profiles the developmental landscape of Arabidopsis root

TQ Zhang, ZG Xu, GD Shang, JW Wang - Molecular plant, 2019 - cell.com
… In this study, using a high-throughput single-cell RNA-sequencing assay, we found that
the cells in Arabidopsis root are highly heterogeneous in their transcriptomes. A total of 24 …

Root transcriptome analysis of Saccharum spontaneum uncovers key genes and pathways in response to low-temperature stress

S Dharshini, NV Hoang, C Mahadevaiah… - Environmental and …, 2020 - Elsevier
… The transcriptome profiling of S. spontaneum under cold stress reveals that SspNIP2 gene
… executed in the plant roots. In this study, root transcriptome analyses were carried out at …