Methodologies for preparation of prokaryotic extracts for cell-free expression systems

SD Cole, AE Miklos, AC Chiao, ZZ Sun… - Synthetic and Systems …, 2020 - Elsevier
… extract methods, with a specific focus on prokaryotic systems. Firstly, we describe the diversity
of Escherichia … We then trace the history of cell-extract methodology over the past 20 years, …

Impact of the Expression System on Recombinant Protein Production in Escherichia coli BL21

G Lozano Terol, J Gallego-Jara… - Frontiers in …, 2021 - frontiersin.org
… One of the main factors affecting metabolic burden is promoter strength. lac-derived
promoters (P T7 lac , P trc , and P tac ) are all based on the negative regulation by LacI, and the …

Multilevel optimisation of anaerobic ethyl acetate production in engineered Escherichia coli

AC Bohnenkamp, AJ Kruis, AE Mars, RH Wijffels… - Biotechnology for …, 2020 - Springer
… In this study, we optimised anaerobic production of ethyl acetate in Escherichia coli. We
compared and evaluated ethyl acetate production by three AATs from different yeasts after …

Improving lysine production through construction of an Escherichia coli enzyme‐constrained model

C Ye, Q Luo, L Guo, C Gao, N Xu… - Biotechnology and …, 2020 - Wiley Online Library
… The resulting ec_iML1515 model showed that the protein demand and protein synthesis
rate were the key factors affecting lysine production. By optimizing the expression of the 20 top-…

Refactoring transcription factors for metabolic engineering

C Deng, Y Wu, X Lv, J Li, Y Liu, G Du, J Chen… - Biotechnology …, 2022 - Elsevier
… and analysis of transcription factor regulons that were reconstructed by the comparative
genomic approach. The database contains a taxonomic set of transcription factors from over 25 …

The Impact of IPTG Induction on Plasmid Stability and Heterologous Protein Expression by Escherichia coli Biofilms

L Gomes, G Monteiro, F Mergulhão - International journal of molecular …, 2020 - mdpi.com
… planktonic and biofilm cells of Escherichia coli JM109(DE3) transformed with a plasmid
containing a T7 promoter. It was shown that induction negatively affected the growth and viability …

[HTML][HTML] Factors influencing the solubilization of membrane proteins from Escherichia coli membranes by styrene–maleic acid copolymers

AH Kopf, JM Dörr, MC Koorengevel… - … et Biophysica Acta (BBA …, 2020 - Elsevier
… Here we employ Escherichia coli membranes containing KcsA as a model protein to investigate
the influence of different environmental conditions on SMA solubilization efficiency. We …

Biological Degradation of the Azo Dye Basic Orange 2 by Escherichia coli: A Sustainable and Ecofriendly Approach for the Treatment of Textile Wastewater

M Ikram, M Naeem, M Zahoor, MM Hanafiah… - Water, 2022 - mdpi.com
… Orange 2 dye degradation using Escherichia coli. This study … both in one time factor
optimization and optimization using central … As a consequence, this optimization technique does …

Codon optimization with deep learning to enhance protein expression

H Fu, Y Liang, X Zhong, ZL Pan, L Huang, HL Zhang… - Scientific reports, 2020 - nature.com
… codon optimization methodoptimization can be converted to sequence annotation of
corresponding amino acids with codon boxes. The codon optimization models for Escherichia Coli …

Metabolic Engineering of Escherichia coli for Lacto-N-triose II Production with High Productivity

Y Zhu, L Wan, J Meng, G Luo, G Chen… - Journal of Agricultural …, 2021 - ACS Publications
… In this study, Escherichia coli was metabolically engineered to efficiently produce LNT II
using glycerol as a carbon source and lactose as a substrate. The UDP-N-acetylglucosamine (…