Microbial genomic taxonomy.

CC Thompson, L Vidal, V Salazar… - … of bacteria and …, 2021 - cabidigitallibrary.org
… required for the naming strategy of genomes. A new species … In this way, the genomic
landscape of the novel bacteriumMicrobial taxonomy is moving from polyphasic taxonomy into …

[HTML][HTML] … of poly-and paraphyly: whole genome-based taxonomy of the family Rhodobacteraceae and the proposal for the split of the “Roseobacter clade” into a novel …

KYH Liang, FD Orata, YF Boucher… - Frontiers in Microbiology, 2021 - frontiersin.org
… As such, we propose to move this group of bacteria into a new … by using genomic analysis
to guide polyphasic taxonomy. A … and genomic data alone. Therefore, we turned to phenotypic …

[HTML][HTML] Update on the proposed minimal standards for the use of genome data for the taxonomy of prokaryotes

R Riesco, ME Trujillo - International Journal of Systematic …, 2024 - microbiologyresearch.org
… for applying genome sequencing data in microbial taxonomy, … Integrating genomics into
the taxonomy and systematics of … and integration of ANIs into polyphasic taxonomy. Int J Syst …

Description of a polyphasic taxonomic approach for plant growth-promoting rhizobacteria (PGPR)

RIR Montoya, VV Ruiz, FIP Cota, G Santoyo… - Microbial Services in …, 2020 - Elsevier
… -generation sequencing, new genomic data is generated in a … The other strategy is de novo
assembly, which is presented … of record for the publication of novel microbial taxa, and the …

Advancements in prokaryotic systematics and the role of Bergey's International Society for Microbial Systematics (BISMiS) in addressing challenges in the meta-data …

J Yu Jiao, R Abdugheni, DF Zhang… - National Science …, 2024 - academic.oup.com
classification to a more comprehensive polyphasic taxonomy … the expanding genomic data,
encompassing genomes from … currently standardized strategies for deducing novel species …

Avrilella dinanensis gen. nov., sp. nov., a novel bacterium of the family Flavobacteriaceae isolated from human blood

C Leyer, M Sassi, F Gourmelen, A Burel… - Systematic and Applied …, 2020 - Elsevier
Polyphasic taxonomic analysis was performed on a novel bacterium, designated UR159 T ,
… Whole genome sequencing revealed a 2.3-Mbp genome encoding a total of 2262 putative …

Description of a Polyphasic Taxonomic Approach for Plant Growth-Promoting Rhizobacteria (PGPR)

S DE LOS SANTOS-VILLALOBOS - Microbial Services in …, 2020 - books.google.com
… of record for the publication of novel microbial taxa, and the … genomic data, taxonomic
affiliation has become essential to … Plant growth promoting bacteria as an alternative strategy for …

Danxiaibacter flavus gen. nov., sp. nov., a novel bacterium of the family Chitinophagaceae isolated from forest soil on Danxia Mountain

ZH Zheng, CY Lu, WH Lian, JR Han… - … of Systematic and …, 2023 - microbiologyresearch.org
… The present study reports on the taxonomic characterization of … from Danxia Mountain in
China using a polyphasic approach. … for the use of genome data for the taxonomy of prokaryotes. …

Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions

Y Liu, J Du, T Pei, H Du, GD Feng, H Zhu - Systematic and Applied …, 2022 - Elsevier
… The use of genome data has recently been recommended as … in the multiple described
polyphasic taxonomic studies and … However, the microbial taxonomists should keep in mind that …

Chemotaxonomy and Genomes

BZ Fang, JY Jiao, S Wang, WJ Li - Modern Taxonomy of Bacteria and …, 2024 - Springer
… of the development of the polyphasic approach to prokaryotic … with the incorporation of
improved genome analysis tools … approaches based on genomic data would also be explored. …