Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa

X Cai, L Chang, T Zhang, H Chen, L Zhang, R Lin… - Genome biology, 2021 - Springer
… We used deletion sequences to evaluate the … “two-step theory” explained that the two
rounds of independent polyploidization and re-diploidization events resulted in fewer fractionated

… and application of SSR markers related to genes involved in leaf adaxial-abaxial polarity establishment in chinese cabbage (Brassica rapa L. ssp. pekinensis)

Y Gao, Y Lu, X Li, N Li, X Zhang, X Su, D Feng… - Frontiers in …, 2020 - frontiersin.org
… Our study could help to accelerate the breeding process of … were selected from 581
insertion-deletion (InDel) markers, 60 … exist in the distribution of exons and sequence length …

Identification of Chromosomes and Chromosome Rearrangements in Crop Brassicas and Raphanus sativus: A Cytogenetic Toolkit Using Synthesized Massive …

N Agrawal, M Gupta, SS Banga… - Frontiers in Plant …, 2020 - frontiersin.org
… translocations, fusions, and deletions. Furthermore, the … were not required with the two-step
cycles and high denaturation … The raw data supporting the conclusions of this article will be …

The last missing piece of the Triangle of U: the evolution of the tetraploid Brassica carinata genome

WC Yim, ML Swain, D Ma, H An, KA Bird, DD Curdie… - bioRxiv, 2022 - biorxiv.org
… The three diploid species (Brassica rapa, B. nigra, and … gene families and the biased
fractionation of one parental genome, … exon analysis, confirms a negative correlation between …

Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self-incompatibility signalling …

T Azibi, H Hadj-Arab, M Lodé, J Ferreira de Carvalho… - Plant reproduction, 2020 - Springer
… SI phenotype between two Brassica rapa varieties that have … least fractionated (LF), medium
fractionated (MF1) and most … we designed, when possible, exon–intron spanning primers in …

Construction of a high-density mutant population of Chinese cabbage facilitates the genetic dissection of agronomic traits

X Sun, X Li, Y Lu, S Wang, X Zhang, K Zhang, X Su… - Molecular Plant, 2022 - cell.com
… Chinese cabbage (Brassica rapa ssp. pekinensis) is an economically important vegetable
… (from the three sub-genomes: least fractionated [LF], medium fractionated [MF1], and most …

Two-step model of paleohexaploidy, ancestral genome reshuffling and plasticity of heat shock response in Asteraceae

X Kong, Y Zhang, Z Wang, S Bao, Y Feng… - Horticulture …, 2023 - academic.oup.com
fractionation comparisons, we suggested that the ACH may be an allohexaploidization event.
Similar to the hexaploidization in Brassica rapa … inversions and minor deletions. First, after …

Sinapis genomes provide insights into whole‐genome triplication and divergence patterns within tribe Brassiceae

T Yang, B Cai, Z Jia, Y Wang, J Wang… - The Plant …, 2023 - Wiley Online Library
… relationship to either Brassica rapa or Brassica oleracea. Two … A “two-step theory” has been
proposed to explain the Br-… 4.74–4.87 exons per transcript and mean exon length of 234.39…

The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

Y Hao, ME Mabry, PP Edger, M Freeling… - Genome …, 2021 - genome.cshlp.org
… The patterns of biased fractionation observed in the genome of Brassica rapa suggested
that the … We sought to first confirm the two-step hexaploidy model and its relationship to the …

Production and cytology of Brassica autoallohexaploids with two and four copies of two subgenomes

B Cai, T Wang, F Yue, A Harun, B Zhu, W Qian… - Theoretical and Applied …, 2022 - Springer
… , C and B origin from a common hexaploid ancestor which formed by a two-step fractionation
… The hybridization and chromosome behavior data used to support the findings of this study …