Visualization of very large high-dimensional data sets as minimum spanning trees

D Probst, JL Reymond - Journal of Cheminformatics, 2020 - Springer
… -dimensional space. Algorithms such as nonlinear principal component analysis (NLPCA),
t-… } } \right)\), limiting the size of to be visualized data sets [31]. The same limitations in terms of …

Using ggtree to visualize data on tree‐like structures

G Yu - Current protocols in bioinformatics, 2020 - Wiley Online Library
… to integrate ggtree into existing analysis workflows/pipelines. … In Figure 2, as an example,
we visualized the tree with … the figure is extended to allocate more space by specifying the plot.…

[HTML][HTML] Iroki: automatic customization and visualization of phylogenetic trees

RM Moore, AO Harrison, SM McAllister, SW Polson… - PeerJ, 2020 - peerj.com
… Phylogenetic trees are an important analytical tool for evaluating community diversity and …
color space, enhancing visualization. Iroki stays responsive even when customizing large trees

[HTML][HTML] Forest data visualization and land mapping using support vector machines and decision trees

S Radhakrishnan, AS Lakshminarayanan… - Earth Science …, 2020 - Springer
… an explanation about various visualization techniques used for data analysis, interpretation,
… Based on the space on the positive side indicates the superiority of the model. On carefully …

ggtreeExtra: compact visualization of richly annotated phylogenetic data

S Xu, Z Dai, P Guo, X Fu, S Liu, L Zhou… - Molecular biology …, 2021 - academic.oup.com
… and visualized with external data. GgtreeExtra is a universal tool for tree data visualization.
… , which can display more data in a given space. However, the geom_facet function does not …

A Novel Forest Dynamic Growth Visualization Method by Incorporating Spatial Structural Parameters Based on Convolutional Neural Network

L Wang, H Zhang, K Lei, T Yang… - IEEE Journal of …, 2023 - ieeexplore.ieee.org
… models still have some space for improvement in terms … tree level , we will adopt the
quantitative analysis method of spatial structure based on the relationships of nearest neighbor trees

Tree space prototypes: Another look at making tree ensembles interpretable

S Tan, M Soloviev, G Hooker, MT Wells - … of the 2020 ACM-IMS on …, 2020 - dl.acm.org
… Figure 3: Visualization of distances using t-sne for optimal GBT with … analysis shows that
there do exist some datasets on which they do not benefit classification. A quantitative analysis

[图书][B] Data integration, manipulation and visualization of phylogenetic trees

G Yu - 2022 - taylorfrancis.com
… The above example is the output tree of a molecular clock analysis and should contain
these inferences. To save space, only the length estimation was shown above. Besides, …

Investigating seasonal color change in the environment by color analysis and information visualization

M Yang - Color Research & Application, 2020 - Wiley Online Library
visualizations derive from several common characteristics of the two gardens, including the
compact layout of buildings with black roof and exuberant trees. … the vast open space in those …

Vismaf: synthetic tree for immersive virtual visualization in smart farming. Part i: scientific background review and model proposal

M Crimaldi, F Cartenì, F Giannino - Agronomy, 2021 - mdpi.com
… support, visualization of ecosystem changes over time, and for simple visualization purposes…
common approaches used to generate 3D tree models, discussing both methodologies and …