Linking genetic markers and crop model parameters using neural networks to enhance genomic prediction of integrative traits
F Larue, L Rouan, D Pot, JF Rami, D Luquet… - Frontiers in Plant …, 2024 - frontiersin.org
… E ivt the residual error for variety v in replicate i of treatment t. … (A), Bayes C (B) or CNN (C)
compared to the direct genomic … non-linear relationships between traits and between CGM …
compared to the direct genomic … non-linear relationships between traits and between CGM …
Multi-trait and multi-environment genomic prediction for flowering traits in maize: a deep learning approach
F Mora-Poblete, C Maldonado, L Henrique… - Frontiers in Plant …, 2023 - frontiersin.org
… Maize (Zea mays L.), the third most widely cultivated cereal … If R0 is the residual covariance
for more than one trait, then R … adjusting the weights that connect the layers to optimize the …
for more than one trait, then R … adjusting the weights that connect the layers to optimize the …
[HTML][HTML] Genome-wide prediction in a hybrid maize population adapted to Northwest China
… ranged from 0.386 to 0.794 across traits and models. Six parametric … Increasing maize (Zea
mays L.) yield is one of the most … implementing various genomic relationships in regressions. …
mays L.) yield is one of the most … implementing various genomic relationships in regressions. …
Decoding the genetic basis of ear‐related traits in maize (Zea mays L.) using linkage mapping, association mapping and genomic prediction
L Chang, K He, J Liu - Plant Breeding - Wiley Online Library
… , X and Z are known design matrices and ε is a random residual … Genome-wide association
study was carried out in each … It was not difficult to draw the conclusion that bin7.03/7.04 was …
study was carried out in each … It was not difficult to draw the conclusion that bin7.03/7.04 was …
Leveraging prior biological knowledge improves prediction of tocochromanols in maize grain
… most abundant tocochromanols in maize (Zea mays L.) grain is … trait) within and between
two panels of 1,462 and 242 maize … field experiments, residual covariance was assumed to be …
two panels of 1,462 and 242 maize … field experiments, residual covariance was assumed to be …
Physiological adaptive traits are a potential allele reservoir for maize genetic progress under challenging conditions
C Welcker, NA Spencer, O Turc, I Granato… - Nature …, 2022 - nature.com
… of examining causal links between the changes in alleles, traits, and … and Bayesian networks,
and (iv) investigated if genomic … G year residual represents the proportion of the variance …
and (iv) investigated if genomic … G year residual represents the proportion of the variance …
Modeling multiple phenotypes in wheat using data‐driven genomic exploratory factor analysis and Bayesian network learning
… into a Bayesian network to obtain a trait structure reflecting … of additive genetic effect and
residuals, respectively, and ⊗ is the … phenotyping data, where relationships within image-based …
residuals, respectively, and ⊗ is the … phenotyping data, where relationships within image-based …
Using single‐plant‐omics in the field to link maize genes to functions and phenotypes
DF Cruz, S De Meyer, J Ampe, H Sprenger… - Molecular Systems …, 2020 - embopress.org
… to genomic prediction to associate genes to plant traits, in … field‐grown maize plants of the
same inbred line (Zea mays B104), … that residual non‐linear laboratory or genotype effects may …
same inbred line (Zea mays B104), … that residual non‐linear laboratory or genotype effects may …
[HTML][HTML] Genome‐wide association analysis of hyperspectral reflectance data to dissect the genetic architecture of growth‐related traits in maize under plant growth …
RM Yassue, G Galli, CPJ Chen, R Fritsche‐Neto… - Plant Direct, 2023 - ncbi.nlm.nih.gov
… We employed Bayesian whole‐genome GWA methods to … 2 are the additive genomic and
residual variances, respectively… Root size and nitrogen‐uptake activity in two maize (Zea mays) …
residual variances, respectively… Root size and nitrogen‐uptake activity in two maize (Zea mays) …
Mapping heat tolerance QTLs and incorporating environmental information to improve genomic prediction in Maize
JP McNellie - 2022 - search.proquest.com
… studies to reduce the genomic region controlling a trait of interest to … Maize (Zea mays L.) is
a major source of calories and biofuel, … index from CERIS to connect the observed phenotypic …
a major source of calories and biofuel, … index from CERIS to connect the observed phenotypic …