… with at least two 10× Genomics Chromium linked reads spanning the connections. Second,
5374 (76.00%) connections were confirmed by at least two BioNano Genomics (BNG) optical …

… Wheat (Triticum aestivum) is a major staple food crop worldwide. Genetic dissection of …
Genome-wide association mapping reveals a rich genetic architecture of complex traits in …

… create the structural variation observed in pan-genomes. Thus… DNA repair by nonhomologous
end joining; microhomology-… to TE insertions and nonhomologous end joining (4). Some …

… of rice consisting of a 251-accession panel comprising both cultivated and wild species of …
-genome reveals extensive structural variations (SVs) and gene presence/absence variations. …

… Pear is a major fruit tree crop distributed worldwide, yet its breeding is a very … gene
identification, here we have performed genome-wide association studies (GWAS) on eleven fruit traits…

… large-scale structural variation between Basmati 334 and Dom Sufid contigs and the japonica
genome. A noticeable exception was an apparent inversion in the circum-basmati genome …

… insertion/deletions (InDels), and over 290,000 structural variations (SVs). We constructed
pan-… Neighbor-joining tree analysis showed the 1913 accessions classify into 12 clades. G. …

… The pangenome provides genomic variations in the cultivated gene pool for a given species.
However, as the crop’s gene pool comprises many … Structural variations in plant genomes. …

… explain how genes and gene networks might be implicated in a complex trait or disease.
New tools are needed to provide scientists with a more fine-grained and connected view of the …

… Mining genes for complex traits is the foundation of biological research, gene editing,
and crop breeding. In biparental segregation populations, methodologies have been well …