Metabolic systems biology and multi-omics of cyanobacteria: Perspectives and future directions
… PCC 7002 found 410 phosphorylation sites on phosphoproteins participating in crucial
molecular methods such as … CyanOmics is a database for integrated omics of Synechococcus sp. …
molecular methods such as … CyanOmics is a database for integrated omics of Synechococcus sp. …
CyanoOmicsDB: an integrated omics database for functional genomic analysis of cyanobacteria
P Zhou, L Wang, H Liu, C Li, Z Li, J Wang… - Nucleic Acids …, 2022 - academic.oup.com
… Compared with CyanOmics that collects several transcriptome and proteome datasets for
Synechococcus sp. PCC 7002, CyanoOmicsDB integrates more omics datasets for sequenced …
Synechococcus sp. PCC 7002, CyanoOmicsDB integrates more omics datasets for sequenced …
Database resources for cyanobacterial research
… have been done on Synechococcus species PCC 7002 cells under different conditions.
CyanOmics database aggregates results of omics studies on this cyanobacterium species. This …
CyanOmics database aggregates results of omics studies on this cyanobacterium species. This …
[PDF][PDF] A hybrid flux balance analysis and machine learning pipeline elucidates metabolic adaptation in cyanobacteria
… -specific GSMMs of Synechococcus sp. PCC 7002 are generated by integrating omics
data, and three pairs of objectives are optimized for each condition-specific model. (4) Bilevel …
data, and three pairs of objectives are optimized for each condition-specific model. (4) Bilevel …
[图书][B] Decomposition of Synechococcus elongatus Transcriptomic Data to Reveal Its Regulatory Modules Through Independent Component Analysis
T Al Bulushi - 2021 - search.proquest.com
… “Machine learning reveals the transcriptional regulatory network and circadian dynamics
of the cyanobacteria Synechococcus elongatus PCC 7942”. The thesis author is the primary …
of the cyanobacteria Synechococcus elongatus PCC 7942”. The thesis author is the primary …
CyanoMapDB: a database integrating experimentally validated protein–protein interactions in cyanobacteria
Z Peng, J Li, X Jiang, C Wan - Plant Physiology, 2023 - academic.oup.com
… Although databases gathering genomic sequences, omics data, and protein … cyanobacterial
data in the existing databases, our database greatly expands PPI datasets in cyanobacteria …
data in the existing databases, our database greatly expands PPI datasets in cyanobacteria …
[HTML][HTML] Emerging Technologies for the Discovery of Novel Diversity in Cyanobacteria and Algae and the Elucidation of Their Valuable Metabolites
G Zammit, MG Zammit, KG Buttigieg - Diversity, 2023 - mdpi.com
… PCC 7002, which was found to metabolize compounds such as histidine betaine and g-…
An integrated omics database for Synechococcus sp. PCC 7002, called CyanOmics, has …
An integrated omics database for Synechococcus sp. PCC 7002, called CyanOmics, has …
A critical review of machine-learning for “multi-omics” marine metabolite datasets
J Manochkumar, AK Cherukuri, RS Kumar… - Computers in Biology …, 2023 - Elsevier
… -scale metabolic model of Synechococcus sp. PCC 7002 “Multi-omics” data from CyanOmics
Prediction and classification of metabolic profiles in cyanobacteria in various growth …
Prediction and classification of metabolic profiles in cyanobacteria in various growth …
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC7002
… expressions in the marine cyanobacterium Synechococcus sp. PCC7002. We identified that
… strain PCC 7002 to nutrient limitations and different nitrogen sources. Front Microbiol 3:145–…
… strain PCC 7002 to nutrient limitations and different nitrogen sources. Front Microbiol 3:145–…
Challenges and prospects for sustainable microalga-based oil: A comprehensive review, with a focus on metabolic and genetic engineering
S Ranjbar, FX Malcata - Fuel, 2022 - Elsevier
… to omics studies and integrated system-biology modeling; however, a “leap of faith” is still
needed, encompassing social acceptance of the huge potential of GMOs to bring about …
needed, encompassing social acceptance of the huge potential of GMOs to bring about …