Species-specific relationships between DNA and chromatin properties of CpG islands in embryonic stem cells and differentiated cells
J Langerman, D Lopez, M Pellegrini, ST Smale - Stem cell reports, 2021 - cell.com
… co-evolved with compensatory genome adaptation events during mammalian evolution. …
CpG islands, we first evaluated DNA methylation at representative CpG islands and CpG-island …
CpG islands, we first evaluated DNA methylation at representative CpG islands and CpG-island …
A comparative methylome analysis reveals conservation and divergence of DNA methylation patterns and functions in vertebrates
H Al Adhami, AF Bardet, M Dumas, E Cleroux… - BMC biology, 2022 - Springer
… genes across mammals. Finally, using chemical inhibition of … -rich regions known as CpG
islands (CGIs) that remain mostly … To differentiate allelic from partial random methylation, we …
islands (CGIs) that remain mostly … To differentiate allelic from partial random methylation, we …
DNA methylation in mammalian development and disease
ZD Smith, S Hetzel, A Meissner - Nature Reviews Genetics, 2024 - nature.com
… CpG islands (CGIs) remain mostly free of methylation throughout these transitions. Many
repetitive elements maintain slightly higher DNA methylation … emerge during differentiation that …
repetitive elements maintain slightly higher DNA methylation … emerge during differentiation that …
DNA methylation in regulatory T cell differentiation and function: challenges and opportunities
… primarily at CpG dinucleotides in mammals [30]. The methylation of CpG sites generally …
deficiency is embryonically lethal coupled with hypermethylation of CpG islands [108], acute …
deficiency is embryonically lethal coupled with hypermethylation of CpG islands [108], acute …
Global DNA methylation pattern involved in the modulation of differentiation potential of adipogenic and myogenic precursors in skeletal muscle of pigs
X Zhang, W Sun, L He, L Wang, K Qiu, J Yin - … Cell Research & Therapy, 2020 - Springer
… , including cell lineage specification and cell differentiation [11, 12]. … b DNA methylation
level across CpG islands in all six … Mammals express at least three classical groups of MAPKs, …
level across CpG islands in all six … Mammals express at least three classical groups of MAPKs, …
Universal DNA methylation age across mammalian tissues
… methylation profiles, the foundation of pan-tissue epigenetic clocks. … development of universal
pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation …
pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation …
Universal DNA methylation age across mammalian tissues
… have been successfully developed for several different … -mammalian clocks that measure
age in all mammalian species. To address this, we generated data using 11,754 methylation …
age in all mammalian species. To address this, we generated data using 11,754 methylation …
Comparative whole genome DNA methylation profiling across cattle tissues reveals global and tissue-specific methylation patterns
… of cell differentiation, with decreased methylation levels and … high frequency in genomic
regions called CpG islands (CGIs), … constitute roughly half of most mammalian genomes [25]. …
regions called CpG islands (CGIs), … constitute roughly half of most mammalian genomes [25]. …
A mammalian methylation array for profiling methylation levels at conserved sequences
A Arneson, A Haghani, MJ Thompson… - Nature …, 2022 - nature.com
… CpG island and methylation status We analyzed the CpG island and DNA methylation
properties of CpGs on the mammalian array. An average of 5563 (19%) of probes in the …
properties of CpGs on the mammalian array. An average of 5563 (19%) of probes in the …
Epigenetics and island‐mainland divergence in an insectivorous small mammal
… CpGs to investigate morphological and DNA methylation patterns … CpG islands (CGI) are
regions of the genome that contain a … Our analysis showed differential methylation patterns and …
regions of the genome that contain a … Our analysis showed differential methylation patterns and …