Transcriptomes analysis reveals novel insight into the molecular mechanisms of somatic embryogenesis in Hevea brasiliensis
Y Wang, HL Li, YK Zhou, D Guo, JH Zhu, SQ Peng - BMC genomics, 2021 - Springer
… the expression profiling using RNA-seq technology. This … level analysis using qRT-PCR
across 6 different tissues of H. … The de novo assembly generated 36,937 unigenes. We …
across 6 different tissues of H. … The de novo assembly generated 36,937 unigenes. We …
De Novo Transcriptome Analysis in Hevea brasiliensis to Unveil Genes Involved in Low Temperature Stress Response.
B Yang, X Shi, T Guo, M Liang - Phyton (0031-9457), 2023 - search.ebscohost.com
… of high-throughput sequencing technology, RNA-seq is a new … -1-phosphate uridyl transferase
were screened in rubber trees … 1-year-old tissue culture seedings of ‘Reyan 73397’ rubber …
were screened in rubber trees … 1-year-old tissue culture seedings of ‘Reyan 73397’ rubber …
RNA Sequencing Reveals Phenylpropanoid Biosynthesis Genes and Transcription Factors for Hevea brasiliensis Reaction Wood Formation
X Meng, Y Wang, J Li, N Jiao, X Zhang, Y Zhang… - Frontiers in …, 2021 - frontiersin.org
… We performed transcriptome analysis of rubber tree mature … our RNA-seq analysis in rubber
tree reaction wood formation. … among the different tissue types in this study may be explained …
tree reaction wood formation. … among the different tissue types in this study may be explained …
… integrative transcriptomic and genomic analysis reveals novel insights into the hub genes and regulatory networks associated with rubber synthesis in H. brasiliensis
Z Ding, L Fu, D Tan, X Sun, J Zhang - Industrial crops and products, 2020 - Elsevier
… Rubber tree (Hevea brasiliensis) is an important tropical plant … In this study, 129 public
available RNA-seq datasets were … each column represent the RNA-seq runs for a given tissue. B. …
available RNA-seq datasets were … each column represent the RNA-seq runs for a given tissue. B. …
[HTML][HTML] Transcriptome dataset from bark and latex tissues of three Hevea brasiliensis clones
… RNA seq statistics from bark and latex tissues is shown in Table … brasiliensis transcriptome
analysis is shown in Table 2. … The raw reads were first screened for sequencing adaptors and …
analysis is shown in Table 2. … The raw reads were first screened for sequencing adaptors and …
Latex-specific transcriptome analysis reveals mechanisms for latex metabolism and natural rubber biosynthesis in laticifers of Hevea brasiliensis
X Long, Y Fang, Y Qin, J Yang, X Xiao - Industrial Crops and Products, 2021 - Elsevier
… The original reads of the transcriptome sequences were screened for … Clean reads of the five
tissues were merged and de novo … RNA-Seq libraries were constructed for the five tissues of …
tissues were merged and de novo … RNA-Seq libraries were constructed for the five tissues of …
Comparative transcriptome analysis of high- and low-embryogenic Hevea brasiliensis genotypes reveals involvement of phytohormones in somatic embryogenesis
L Li, X Sun, W Yu, M Gui, Y Qiu, M Tang, H Tian… - BMC Plant …, 2023 - Springer
… of plant SE, RNA-seq analyses have been performed to … from the triplicate samples of
each tissue of the two genotypes … by correction of the hypothesis testing probability using the …
each tissue of the two genotypes … by correction of the hypothesis testing probability using the …
Genome-wide identification of lncRNAs, miRNAs, mRNAs and their regulatory networks involved in tapping panel dryness in rubber tree (Hevea brasiliensis)
H Liu, Y Hu, K Yuan, C Feng, Q He, L Sun… - Tree …, 2022 - academic.oup.com
… Here, the whole transcriptome analyses of bark tissues from … bark tissues from healthy and
TPD trees in the present study. … we performed high-throughput RNA-seq of barks from healthy …
TPD trees in the present study. … we performed high-throughput RNA-seq of barks from healthy …
Comparative transcriptome analysis identifies potentially relevant genes in rubber clones with a high latex yield (Hevea brasiliensis)
MFA Bakar, AS Othman - Journal Of Agrobiotechnology, 2022 - journal.unisza.edu.my
… De novo assembly of the reference reads was performed using Trinity v2.6.5 (Grabherr et
al. … and the RNA-seq dataset in this work, with expression in RRIM 3001 tissues remaining …
al. … and the RNA-seq dataset in this work, with expression in RRIM 3001 tissues remaining …
Comparative Transcriptome and Metabolome Analysis of Rubber Trees (Hevea brasiliensis Muell. Arg.) Response to Aluminum Stress
X Ma, L Cheng, W Peng, G Xie, Z Liu, Z Yang, Y Wang… - Forests, 2023 - mdpi.com
… transcription factors, by transcriptomic analysis of buckwheat root … The two-year-old
whorled-leaf rubber tree sapling tissues were … To confirm the reliability of RNA-seq data, we …
whorled-leaf rubber tree sapling tissues were … To confirm the reliability of RNA-seq data, we …