Elucidation of multiple alkane hydroxylase systems in biodegradation of crude oil nalkane pollution by Pseudomonas aeruginosa DN1

YP Li, JC Pan, YL Ma - Journal of applied microbiology, 2020 - academic.oup.com
… main parts of petroleum hydrocarbons in crude oil, n‐alkanes … the gene expression profiles
of five alkane hydroxylase … that alkB 2 encodes a functional alkane hydroxylase which was …

Unravelling the role of GntR on the regulation of alkane hydroxylase AlkB2 in Pseudomonas aeruginosa DN1 based on transcriptome analysis

J Pan, F Wei, Y Liu, Y Xu, Y Ma - Journal of Applied …, 2022 - academic.oup.com
… as a repressor of alkB 2 expression, and that n‐alkane abolished its activity. We conclude
that GntR acts principally as a repressor to adjust the gene expressions of alkB 2 , in line with …

[HTML][HTML] Integrated Comparative Genomic Analysis and Phenotypic Profiling of Pseudomonas aeruginosa Isolates From Crude Oil

A Xu, D Wang, Y Ding, Y Zheng, B Wang… - Frontiers in …, 2020 - frontiersin.org
… RGP10 is a 48.9 kb genomic element with 56 CDSs including the … , two alkane hydroxylases
were found in the “shell genome” (an almA gene in RGP10, and a cytochrome P450 gene in …

Characterization of two novel strains of Pseudomonas aeruginosa on biodegradation of crude oil and its enzyme activities

B Muthukumar, MS Al Salhi, J Narenkumar… - Environmental …, 2022 - Elsevier
… The components of MSM broth (g/L): NaCl (1.0); NaNO 3 (4.0); KCL (1.0); FeSO 4 .7H … of
alkane hydroxylase enzyme by Pseudomonas aeruginosa PP3 and Pseudomonas aeruginosa

Transcriptome analysis of crude oil degrading Pseudomonas aeruginosa strains for identification of potential genes involved in crude oil degradation

D Das, GT Mawlong, YN Sarki, AK Singh… - Gene, 2020 - Elsevier
… The differential gene expression analysis was performed using DESeq (R Package) version
… genes with p < 0.05. A comparison in the normalized gene expression (log 2 fold change) of …

Exoproteome analysis of Pseudomonas aeruginosa response to high alkane stress

Y Dou, X Zhou, X Liu, J Hou - Archives of Microbiology, 2024 - Springer
Alkanes are one of the major components of petroleum, … , we investigated the intracellular
gene expression of P. … has demonstrated that alkane degradation involves hydroxylation of the …

[PDF][PDF] ANALYSIS OF ALKB2 AND LCAR OPERON GENE EXPRESSION IN RESPONSE TO N-ALKANES IN Pseudomonas aeruginosa PAO1

W Hemamali, IC Perera - 10TH YSF SYMPOSIUM, 2022 - researchgate.net
… The objective of this study is to determine in vivo differential gene expression of … Differential
expression of the components of the two alkane hydroxylases from Pseudomonas aeruginosa

Leveraging Bioinformatics to Elucidate the Genetic and Physiological Adaptation of Pseudomonas aeruginosa to Hydrocarbon-Rich Jet Fuel

TS Gunasekera - Microbial Bioinformatics in the Oil and Gas …, 2021 - taylorfrancis.com
… processes involved with gene expression and genetic and … K-mean clustering, principal
component analysis (PCA), and … including integral membrane di-iron alkane hydroxylases (eg …

Genome-Wide Expression Analysis Unravels Fluoroalkane Metabolism in Pseudomonas sp. Strain 273

Y Xie, D Ramirez, G Chen, G He, Y Sun… - Environmental …, 2023 - ACS Publications
… (p < 0.001) of alkB-2 gene expression determined by a two-… AlkB-type alkane hydroxylases
are integral membrane non-… in Pseudomonas aeruginosa. (50) Located adjacent to alkB-…

LcaR: a regulatory switch from Pseudomonas aeruginosa for bioengineering alkane degrading bacteria

EH Hemamali, LP Weerasinghe, H Tanaka, G Kurisu… - Biodegradation, 2022 - Springer
… alkB2 gene expression. The alkB1 and alkB2 genes may not be expressed simultaneously
… was amplified from Pseudomonas aeruginosa PAO1 genomic DNA in a two-step polymerase …