HIV-1 genetic diversity and transmitted drug resistance to integrase strand transfer inhibitors among recently diagnosed adults in Porto Alegre, South Brazil

CC Nunes, A Sita, L Mallmann… - Journal of …, 2022 - academic.oup.com
… It was estimated that there were 930 000 people living with HIV infection in … In the present
work, the HIV-1 subtype composition in South Brazil was evaluated using the integrase gene. …

… of HIV-1 antiretroviral drug resistance profiles in the peripheral blood reservoir of successfully treated persons using massive sequencing and viral full genome …

OM Botelho, RP Basso, LD Da Mota… - Journal of …, 2023 - academic.oup.com
… high genetic variability that allows its classification into groups … genetic composition of the
archived HIV-1 proviruses in a cohort of patients with undetectable viral load from two Brazilian

[HTML][HTML] HIV-1 genetic diversity and divergence and its correlation with disease progression among antiretroviral naïve recently infected individuals

AR Leda, J Hunter, UC de Oliveira, IJ de Azevedo… - Virology, 2020 - Elsevier
… technology among recently infected patients from Brazil and … control HIV-1 clonal plasmids
to calculate the amplification/… tools as the next generation sequencing. In this paper, we …

HIV-1 diversity and pre-treatment drug resistance in the era of integrase inhibitor among newly diagnosed ART-naïve adult patients in Luanda, Angola

CS Sebastião, AB Abecasis, D Jandondo… - Scientific Reports, 2024 - nature.com
… Herein, we investigated the HIV-1 genetic diversity and pretreatment … The next-generation
sequencing (NGS) approach based on … of Angolan sequences with Brazilian and European …

HIV-1 genetic diversity, volume II

KK Tee, MM Thomson, J Hemelaar - Frontiers in Microbiology, 2022 - frontiersin.org
using whole genome sequencing and detailed phylogenetic and recombination analyses.
Bayesian coalescent analyses, which estimated the … that was described in Brazil. The study …

HIV-1 genotypic drug resistance testing and Next-generation sequencing

B Liang, M Murray, R Sampathkumar… - Frontiers in Clinical Drug …, 2021 - books.google.com
… In this chapter, we will review the HIV-1 genotypic DR testing methods with the focus on the
main NGS platforms available for HIV-1 DR diagnosis, their characteristics, applications, and …

Genomic Detection of the Emerging, Highly Pathogenic HIV-1 Subtype D in Bahia, Northeast Brazil

FF de Almeida Rego, L de Moraes, M Giovanetti… - Viruses, 2023 - mdpi.com
genetic diversity can be classified in a wide variety of groups (M, N, O, and P). The HIV-1 group
M viruses can be further subdivided into … SS) procedures to estimate the most appropriate …

Transmitted HIV1 drug resistance in a large international cohort using nextgeneration sequencing: results from the Strategic Timing of Antiretroviral Treatment …

JD Baxter, D Dunn, A Tostevin, RL Marvig… - HIV …, 2021 - Wiley Online Library
… and geographical region could not be estimated due to the very strong association
between these two variables. All statistical analyses were conducted using STATA v.15 (StataCorp, …

Dual Infection of Different Clusters of HIV in People Living with HIV Worldwide: A Meta-Analysis Based on Next-Generation Sequencing Studies

D Yuan, F Zhao, S Liu, Y Liu, H Yan, L Liu… - AIDS Patient Care …, 2024 - liebertpub.com
genetic diversity of HIV, affecting the estimation of HIV infection time and incidence rate based
on HIV genetic diversity, … F1 dual infection in HIV-1 positive, Brazilian men who have sex …

Evolutionary dynamics of HIV-1 subtype C in Brazil

B Souto, V Triunfante, A Santos-Pereira, J Martins… - Scientific reports, 2021 - nature.com
genetic diversity of HIV-1 is a major challenge for the prevention and treatment of HIV-1
The estimates for the time of the MRCA for each cluster ranged from 1992 to 2009. The cluster …