Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture

M Marcet-Houben, F Cruz, J Gómez-Garrido, TS Alioto… - Msystems, 2024 - Am Soc Microbiol
genes remaining in the other species. Convergent evolution is also unlikely given that these
genes … Interestingly, we found a conserved secondary metabolism gene cluster between L. …

Beyond the genomes of Fulvia fulva (syn. Cladosporium fulvum) and Dothistroma septosporum: New insights into how these fungal pathogens interact with their …

CH Mesarich, I Barnes, EL Bradley… - Molecular plant …, 2023 - Wiley Online Library
genes encoding candidate effectors and three genes encoding key enzymes for secondary
metabolism … In addition, the evolution of Rcr3 is further impacted by its interaction with the Cf- …

DsEcp2-1 is a polymorphic effector that restricts growth of Dothistroma septosporum in pine

Y Guo, L Hunziker, CH Mesarich, P Chettri… - Fungal Genetics and …, 2020 - Elsevier
… are evolutionary relics with no function in D. septosporum, like some of the secondary metabolite
genes … that the MfEcp2-1 effector from the hemibiotrophic pathogen P. fijiensis is, unlike …

Metarhizium: jack of all trades, master of many

RJ St. Leger, JB Wang - Open Biology, 2020 - royalsocietypublishing.org
… use of Metarhizium secondary metabolites (SMs) (that is low-… Many Metarhizium isolates
may function as hemibiotrophic … These CAZymes may be relics inherited from an ancestor that …

[HTML][HTML] An overview of genomics, phylogenomics and proteomics approaches in Ascomycota

L Muggia, CG Ametrano, K Sterflinger, D Tesei - Life, 2020 - mdpi.com
… of effector genes than hemibiotrophic and necrotrophic fungi [… of secondary metabolite gene
clusters and genes coding for … Long branch attraction artifacts, especially if the phylogenetic …

[HTML][HTML] Characterization of growth morphology and pathology, and draft genome sequencing of Botrytis fabae, the causal organism of chocolate spot of faba bean …

RC Lee, LM Farfan-Caceres, JW Debler… - Frontiers in …, 2020 - frontiersin.org
… uncharacterized secondary metabolite biosynthesis genes … data, we cannot rule out that
this case of gene absence was not … or the divergence and evolution of the two NLP genes has …

The Role of Secondary Metabolites in the Fungal Community of Black Apples

SE Clemmensen - 2023 - orbit.dtu.dk
evolutionary significance. These clusters can evolve through … One of the most commonly
used dominant markers for fungal … artefacts) may be significant, when studying the effect of spe …

Chemometrics and genome mining reveal an unprecedented family of sugar acid–containing fungal nonribosomal cyclodepsipeptides

C Wang, D Xiao, B Dun, M Yin… - Proceedings of the …, 2022 - National Acad Sciences
… group of nonribosomal peptide secondary metabolites, were … intramolecular transesterification
or artifacts of isolation. … , predominantly destructive hemibiotrophic phytopathogens (50) …

Comparative Genomic Analysis of 31 Phytophthora Genomes Reveals Genome Plasticity and Horizontal Gene Transfer

BA Kronmiller, N Feau, D Shen… - Molecular Plant …, 2023 - Am Phytopath Society
… peak represents rapidly evolving genes that are conserved in … four genes transfer at the
transition to hemibiotrophic lifestyle … To reduce errors caused by genome assembly artifacts, and …

[HTML][HTML] Foliar mycobiome remains unaltered under urban air-pollution but differentially express stress-related genes

VS Flores-Almaraz, C Truong, D Hernández-Oaxaca… - Microbial Ecology, 2024 - Springer
… , differentially expressed genes associated with secondary metabolism and fungal biomass
… to eliminate potential sequencing artifacts. To account for the variation in the number of ITS2 …