Genomic insight into differentiation and selection sweeps in the improvement of upland cotton

MF Nazir, Y Jia, H Ahmed, S He, MS Iqbal, Z Sarfraz… - Plants, 2020 - mdpi.com
… Hereby, we report a comprehensive assessment of … genetic diversity among studied cultivars
of upland cotton and also … on a genetic level corresponding to modern cultivars. Chen et al. […

Deciphering cotton genomic variations for “genes to jeans”

QH Zhu - Molecular Plant, 2023 - cell.com
… of nine elite upland cotton cultivars uncovers genic variations and … , characterizing intraspecific
large SVs in the cotton varieties … Major impacts of widespread structural variation on gene

Extensive haplotypes are associated with population differentiation and environmental adaptability in Upland cotton (Gossypium hirsutum)

P Dai, G Sun, Y Jia, Z Pan, Y Tian, Z Peng, H Li… - … and Applied Genetics, 2020 - Springer
… New cotton cultivars adapted to this region urgently need to be … the genetic basis of the
adaptability of Upland cotton germplasm could better guide the development of new cultivars in …

… , Mapping and Overcoming Genomic Impediments to Intraspecific Genetic Improvement of Upland Cotton Through Interspecific Hybridization and Introgression

LM De Santiago - 2020 - oaktrust.library.tamu.edu
… rely exclusively on genetic variation among cultivars and elite … cotton improvement involving
extensive use interspecific … for their diligence in making the Genetics Program a well-running …

Genomic insights into genetic improvement of upland cotton in the world's largest growing region

Z Han, H Chen, Y Cao, L He, Z Si, Y Hu, H Lin… - Industrial Crops and …, 2022 - Elsevier
… 486 upland cotton accessions with ~10.51-fold coverage depth, which represented an extensive
collection of cultivars grown … cultivars and investigate particular mechanisms of genetic

Deltapine 15 contributes to the genomic architecture of modern upland cotton cultivars

Y Liu, MF Nazir, S He, H Li, Z Pan, G Sun, P Dai… - … and Applied Genetics, 2022 - Springer
… Therefore, understanding the relationship between the formation of excellent characters and
the extensive adaptability of DLP-15 and derivative cultivars is of great significance to future …

[HTML][HTML] Analysis of the genetic structure and diversity of upland cotton groups in different planting areas based on SNP markers

J Wang, Z Zhang, Z Gong, Y Liang, X Ai, Z Sang, J Guo… - Gene, 2022 - Elsevier
… In this study, adopt 273 elite upland cotton cultivar accessions … Chinese cotton planting
area is very large, but upland cotton … The intraspecific genetic diversity was far lower than the …

Population Genomics Unravels the Characteristic Relationship between Introgression and Geographical Distribution in Upland Cotton

C Shen, Z Cao, Z Xu, L Ouyang, X Zhang, Z Guo, J Yu… - Agronomy, 2023 - mdpi.com
comprehensive genomic data based on 890 upland cotton accessions … data sets, we explored
the extent of intraspecific … −scaled introgression of upland cotton cultivars at the genome−…

Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons

S Jin, Z Han, Y Hu, Z Si, F Dai, L He, Y Cheng, Y Li… - Molecular Plant, 2023 - cell.com
… elimination of the interspecific reproductive isolation between Gossypium hirsutum and G.
barbadense. Collectively, this study provides new insights into genome-wide, gene-scale SVs …

Introgression leads to genomic divergence and responsible for important traits in upland cotton

S He, P Wang, YM Zhang, P Dai, MF Nazir… - Frontiers in Plant …, 2020 - frontiersin.org
… A06 and A08 in Upland cotton cultivar subgroups. Based on the … However, the genetic basis
of interspecific hybridization and … extensive adaptability to modern Chinese Upland cotton