EVALUATING TRANSCRIPTOME ASSEMBLY POTENTIAL BY DIFFERENT DE NOVO SEQUENCE ASSEMBLER TYPES

L Gardenalli - 2023 - diva-portal.org
… The gender of the mussel samples used in this study is unknown, so gender-specific expressed
genes are not reflected in the assemblies. No potential conflicts of interests are declared, …

A survey of transcripts generated by spinal muscular atrophy genes

NN Singh, EW Ottesen, RN Singh - Biochimica et Biophysica Acta (BBA) …, 2020 - Elsevier
… The loci of the SMN genes generate a diversity of transcripts, including multiple alternatively
… ) TSS usage determined by CAGE sequencing. The relative TSS usage of the SMN genes is …

Heteroplasmy and repeat expansion in the plant-like mitochondrial genome of a bivalve mollusc

A Calcino, C Baranyi, A Wanninger - bioRxiv, 2020 - biorxiv.org
… We discuss the parallels between plant and bivalve mitochondrial genome organisation
and suggest that future studies should focus on DNA repair processes within the Bivalvia, in …

GSRNet, an adversarial training-based deep framework with multi-scale CNN and BiGRU for predicting genomic signals and regions

G Zhu, Y Fan, F Li, ATH Choi, Z Tan, Y Cheng… - Expert Systems with …, 2023 - Elsevier
… A genome carries many functional genomic signals and regions (GSRs), which play a vital
role … within a genomic sequence is the first step to an understanding of genomic organization …

Unravelling mosquito species complex through DNA barcodes: complementing morphological identification for accurate discrimination

D Panda, TK Barik - Molecular Identification of Mosquito Vectors and Their …, 2020 - Springer
… At present, the genomic as well as mitochondrial genes are … The mitochondrial genome
appears to be highly suited for … of the life cycle or gender-specific. Furthermore, phenotypic …

[PDF][PDF] Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in Gorteria diffusa

RT Kellenberger, U Ponraj, B Delahaie, R Fattorini… - Current Biology, 2023 - cell.com
… To further distinguish general petal spot genes from genes underlying sexually deceptive
petal spot components, we conducted a second DE analysis between spotted florets of …

Parental mutations influence wild-type offspring via transcriptional adaptation

Z Jiang, MA El-Brolosy, V Serobyan, JM Welker… - Science …, 2022 - science.org
… mutation in an ancestral genome can influence the offspring’… expression of the adapting
genes and term this phenomenon … involvement of gender-specific posttranscriptional regulation. …

Genetic resources of Asian palmyrah palm (Borassus flabellifer L.): a comprehensive review on diversity, characterization and utilization

S Siju, KK Sabu - Plant Genetic Resources, 2020 - cambridge.org
… describing attempts made on the identification and development of gender-specific
molecular markers in palmyrah. Though these studies could identify sex-specific amplicons in …

Delineating the Putative Protein O-fucosyltransferase Family in Arabidopsis thaliana

DK Smith - 2021 - search.proquest.com
… Terrestrial plant genomes are widely expanded in genes that … Specifically, in Arabidopsis
thaliana, 39 genes are predicted … ) to allow for the gender specific structures to be visualized. …

Proto-sex locus in large yellow croaker provides insights into early evolution of the sex chromosome

Z Wang, S Xiao, M Cai, Z Han, W Li, Y Xie, G Xu, A Lin… - Biorxiv, 2020 - biorxiv.org
… We clustered the teleost genomes into small, medium and large sized genomes based on
… evolution than that of incompletely differential sex chromosomes with gender-specific loci. …