Tools and strategies of systems metabolic engineering for the development of microbial cell factories for chemical production

YS Ko, JW Kim, JA Lee, T Han, GB Kim… - Chemical Society …, 2020 - pubs.rsc.org
tools and strategies of systems metabolic engineering, including in silico genome-scale
metabolic simulation, sophisticated enzyme engineering, … , and genomic engineering, employed …

[HTML][HTML] Dynamic control in metabolic engineering: Theories, tools, and applications

CJ Hartline, AC Schmitz, Y Han, F Zhang - Metabolic engineering, 2021 - Elsevier
… Recent advances in synthetic biology and systems biology have provided the tools for
dynamic metabolic engineering while control theory has provided new design principles for …

[HTML][HTML] Machine learning for metabolic engineering: A review

CE Lawson, JM Martí, T Radivojevic… - … Engineering, 2021 - Elsevier
… unique opportunity to make metabolic engineering more predictable. In this review, we offer
an introduction to this discipline in terms that are relatable to metabolic engineers, as well as …

A guide to metabolic flux analysis in metabolic engineering: Methods, tools and applications

MR Antoniewicz - Metabolic engineering, 2021 - Elsevier
… are central concepts in metabolic engineering, as was emphasized in the first paper published
in this journal, “Metabolic fluxes and metabolic engineering” (Metabolic Engineering, 1: 1–…

Automated engineering of synthetic metabolic pathways for efficient biomanufacturing

I Otero-Muras, P Carbonell - Metabolic Engineering, 2021 - Elsevier
Metabolic engineering is nowadays on track towards a truly … metabolic pathways in engineered
producer strains. In this review, we discuss how the success of the metabolic engineering

[HTML][HTML] Systems biology approaches integrated with artificial intelligence for optimized metabolic engineering

M Helmy, D Smith, K Selvarajoo - Metabolic engineering communications, 2020 - Elsevier
… Here, we review the latest attempts of combining systems biology and AI in metabolic
engineering research, and highlight how this alliance … combining different sub-model simulations. …

[图书][B] Biological Reaction Engineering: Dynamic Modeling Fundamentals with 80 Interactive Simulation Examples

E Heinzle, IJ Dunn, J Ingham, JE Přenosil - 2021 - books.google.com
… A special aim of this book is to demonstrate that you do not have to be an engineer to
learn modeling and simulation. The basic concepts of the material balance, combined with …

Metabolic engineering: methodologies and applications

MJ Volk, VG Tran, SI Tan, S Mishra, Z Fatma… - Chemical …, 2022 - ACS Publications
… and tools used in metabolic engineering with a focus on the DBTL cycle in the model organisms
E. coli … Then, we highlight some representative applications of metabolic engineering for …

[HTML][HTML] Genome-scale metabolic modeling enables in-depth understanding of big data

A Passi, JD Tibocha-Bonilla, M Kumar, D Tec-Campos… - Metabolites, 2021 - mdpi.com
… In the coming sections, we discuss various tools that apply FBA to predict the metabolic
the metabolic fluxes and non-steady-state conditions [31]. Below, we review high-quality models

Model-driven engineering of microbial metabolism

RP van Rosmalen - 2022 - search.proquest.com
… experimental tools and models available for metabolic engineering. 1.3 Computational
modelling … In chapter 2 I review model-driven metabolic engineering, consolidating the lessons I …