Estimating brain connectivity with diffusion-weighted magnetic resonance imaging: promise and peril

MD Grier, J Zimmermann, SR Heilbronner - … : Cognitive Neuroscience and …, 2020 - Elsevier
… In this review, we are particularly interested in how dMRI data are used to model neuronal
… This suggests that subject- or tract-specific optimization may dramatically improve accuracy. …

Early adversity changes the economic conditions of structural brain network organisation

S Carozza, J Holmes, PE Vértes, E Bullmore, TM Arefin… - BioRxiv, 2022 - biorxiv.org
neural processes through which early adversity exerts these effects remain largely unknown.
We used generative network modelling of the mouse connectome … used to optimise model …

[HTML][HTML] Connectomic mapping of brain-spinal cord neural networks: future directions in assessing spinal cord injury at rest

L Zhang, L Wang, H Xia, Y Tan, C Li, C Fang - Neuroscience Research, 2022 - Elsevier
… analysis looking at large-scale neural networks. This have … at the lower level is not as
optimized as at the cervical level (… Adding diffusion tensor imaging (DTI) to simultaneous fMRI or …

A Data-Driven Framework for Whole-Brain Network Modeling with Simultaneous EEG-SEEG Data

K Lou, J Li, M Barth, Q Liu - International Conference on Intelligent …, 2024 - Springer
… To test the efficacy of WBM in revealing brain-wide neural … In this section, we optimized our
model using a combined … to reveal the large-scale spatiotemporal dynamics in the brain. We …

Cross-hemispheric communication: Insights on lateralized brain functions

S Ocklenburg, ZV Guo - Neuron, 2024 - cell.com
Using this optimized protocol, unilateral inhibition of the premotor cortex … Large-scale,
multi-regional recording of neural activity … (DTI) study in 138 small and large human brains found a …

[HTML][HTML] Cytoarchitecture of the mouse brain by high resolution diffusion magnetic resonance imaging

N Wang, LE White, Y Qi, G Cofer, GA Johnson - Neuroimage, 2020 - Elsevier
… The goal of this present work is to optimize MRH methods for … are dense with small stellate
neurons, interneurons, and glia … In vivo human brain DTI at submillimeter isotropic resolution (…

[HTML][HTML] The role of spatial embedding in mouse brain networks constructed from diffusion tractography and tracer injections

S Trinkle, S Foxley, G Wildenberg, N Kasthuri… - Neuroimage, 2021 - Elsevier
… data in mice and neural tracer data from the Allen Mouse Brain … the true mesoscale connectome
of the mouse brain. Furthermore, … of each brain graph was determined by optimizing the …

[HTML][HTML] Using mesoscopic tract-tracing data to guide the estimation of fiber orientation distributions in the mouse brain from diffusion MRI

Z Liang, TM Arefin, CH Lee, J Zhang - Neuroimage, 2023 - Elsevier
… In this dataset, the soma, dendrites, and axons of selected neurons labelled using low-titer …
The network can be extended to include dMRI data acquired using optimized parameters or …

Structure and function in artificial, zebrafish and human neural networks

P Ji, Y Wang, T Peron, C Li, J Nagler, J Du - Physics of Life Reviews, 2023 - Elsevier
… Curiously, modularity optimization also suffers from the problem of … A large-scale dynamical
model in the macroscopic scale in the … system defined by the connectome of the nematode C.…

Mtneuro: A benchmark for evaluating representations of brain structure across multiple levels of abstraction

J Quesada, L Sathidevi, R Liu, N Ahad… - Advances in neural …, 2022 - proceedings.neurips.cc
… in MRI and related modalities like DTI and fMRI. For example, … -resolution sections from the
mouse brain with Nissl contrast (39), … tools for emerging large-scale neuroimaging datasets. …