[HTML][HTML] Long-term comparison between index selection and optimal independent culling in plant breeding programs with genomic prediction

LG Batista, RC Gaynor, GRA Margarido, T Byrne… - Plos one, 2021 - journals.plos.org
… correlation, we report the correlation between the true genetic values of T1 and T2. We
calculated this metric on the individuals in the F 1 population at each cycle of selection. …

Quantitative assessment of observed versus predicted responses to selection

C Pélabon, E Albertsen, AL Rouzic, C Firmat… - …, 2021 - academic.oup.com
use these to illustrate some difficulties in predicting multivariate selection responses from
estimated G-matrices. We present a simple pedigree-… the mean of a quantitative trait. The first is …

[HTML][HTML] Multi-trait genomic prediction improves predictive ability for dry matter yield and water-soluble carbohydrates in perennial ryegrass

SK Arojju, M Cao, M Trolove, BA Barrett… - Frontiers in Plant …, 2020 - frontiersin.org
… for both ST and MT genomic prediction, a linear mixed model with additive variance-covariance
matrix would be useful for predicting quantitative traits such as DMY and nutritive traits. …

[HTML][HTML] Increasing genomic prediction accuracy for unphenotyped full-sib families by modeling additive and dominance effects with large datasets in white spruce

S Nadeau, J Beaulieu, SA Gezan, M Perron… - Frontiers in Plant …, 2023 - frontiersin.org
… In tree species, only a few reliable estimates of both dominance and epistatic genetic
variances were reported using pedigree-based methods and clonal trials. While some studies …

Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding

C Anilkumar, TP Muhammed Azharudheen, RP Sah… - Heredity, 2023 - nature.com
… increases prediction accuracy compared to pedigreegene-derived markers would ensure
better rewards in genomic selection in plant breeding programs for improving quantitative traits

[HTML][HTML] Genomic prediction using a reference population of multiple pure breeds and admixed individuals

E Karaman, G Su, I Croue, MS Lund - Genetics Selection Evolution, 2021 - Springer
… correlation of quantitative trait loci (QTL) effects between the breeds. … using SNP effects from
any of the pure breeds to predict the … for breed proportions, estimated either from pedigree or …

Accurate prediction of complex traits for individuals and offspring from parents using a simple, rapid, and efficient method for gene-based breeding in cotton and maize

YH Liu, M Zhang, CF Scheuring, M Cilkiz, SH Sze… - Plant Science, 2022 - Elsevier
prediction of complex or quantitative traits controlled by numerous genes is crucial to enhanced
plant breeding, … prediction of complex traits for individuals using the NFAs of 226 GFL …

[HTML][HTML] Marker selection in multivariate genomic prediction improves accuracy of low heritability traits

J Klápště, HS Dungey, EJ Telfer, M Suontama… - … in Genetics, 2020 - frontiersin.org
Quantitative traits normally present low to moderate heritability, as a result of their genetic
The multivariate scenarios using all available markers (MVGBLUP) or pedigree/sib-ship …

[HTML][HTML] Impact of genomic prediction model, selection intensity, and breeding strategy on the long-term genetic gain and genetic erosion in soybean breeding

ÉDB Silva, A Xavier, MV Faria - Frontiers in Genetics, 2021 - frontiersin.org
… Genomic prediction has become an important tool for selection and breeding in agriculture
as it can enhance the rate of genetic gain in comparison to pedigree and phenotype-based …

[HTML][HTML] Accelerating genetic gain in sugarcane breeding using genomic selection

S Yadav, P Jackson, X Wei, EM Ross, K Aitken… - Agronomy, 2020 - mdpi.com
… with or without the use of pedigree information. The … genomic prediction approaches is that
quantitative traits are … long-term genetic gain for complex quantitative traits in sugarcane, but …