Deep profiling of cellular heterogeneity by emerging singlecell proteomic technologies

L Yang, J George, J Wang - Proteomics, 2020 - Wiley Online Library
… and cellcell interactions and highlighting tumor heterogeneity. However, the mass cytometry
approachesprobes. Another distinct advantage of the droplet-based microfluidics for …

A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling

J Qian, S Olbrecht, B Boeckx, H Vos, D Laoui… - Cell research, 2020 - nature.com
… we profile 233,591 single cells from patients with lung, colorectal, ovary and breast cancer (n
= 36) and construct a pan-cancer … Our approach was less successful for cancer cells, which …

An integrated gene expression landscape profiling approach to identify lung tumor endothelial cell heterogeneity and angiogenic candidates

J Goveia, K Rohlenova, F Taverna, L Treps… - Cancer cell, 2020 - cell.com
… of endothelial cells (ECs) to block tumorcancer using single-cell RNA sequencing in
combination with orthogonal bulk multi-omics approaches to provide a molecular atlas of tumor EC (…

Applications of single-cell sequencing in cancer research: progress and perspectives

Y Lei, R Tang, J Xu, W Wang, B Zhang, J Liu… - Journal of hematology & …, 2021 - Springer
cells and immune cells, tumor heterogeneity, circulating … and immune cells because it can
probe cellular and … The 10X Genomics platform, which is based on a microfluidics approach, is …

Single-cell RNA sequencing reveals cell heterogeneity and transcriptome profile of breast cancer lymph node metastasis

K Xu, R Wang, H Xie, L Hu, C Wang, J Xu, C Zhu, Y Liu… - Oncogenesis, 2021 - nature.com
… future studies on tumor heterogeneity and pave … probe the genomic profile of breast cancer,
we applied inferCNV algorithm to analyze the copy-number variants (CNVs) of a single cell

Single-cell omics traces the heterogeneity of prostate cancer cells and the tumor microenvironment

X Yu, R Liu, W Gao, X Wang, Y Zhang - Cellular & Molecular Biology …, 2023 - Springer
… A study [32] probed the heterogeneity of CAFs in human primary prostate cancer by two
different scRNA-seq methods (10 × Chromium and Fluidigm C1) and identified six subgroups of …

Single-cell sequencing technology in tumor research

X Bai, Y Li, X Zeng, Q Zhao, Z Zhang - Clinica Chimica Acta, 2021 - Elsevier
Tumor heterogeneity is a key characteristic of malignant … Herein, we review the steps and
methods of single-cell … Then, we isolate a single cell and move on to the downstream analysis (…

Longitudinal single-cell profiling reveals molecular heterogeneity and tumor-immune evolution in refractory mantle cell lymphoma

S Zhang, VC Jiang, G Han, D Hao, J Lian, Y Liu… - Nature …, 2021 - nature.com
heterogeneity, we applied a computational approach (inferCNV) … than intra-tumoral
heterogeneity (Fig. 4a). We noted that … in MCL to reveal tumor heterogeneity, to track clonal …

Investigating tumor heterogeneity in mouse models

T Tammela, J Sage - Annual Review of Cancer Biology, 2020 - annualreviews.org
Cancer arises from a single cell through a series … single-cell studies where sequencing
depth has been an issue. However, these approaches lack the ability to prospectively probe cell

Inter-and intra-tumor heterogeneity of metastatic prostate cancer determined by digital spatial gene expression profiling

L Brady, M Kriner, I Coleman, C Morrissey… - Nature …, 2021 - nature.com
probes (median of 10 probes/target mRNA) for each gene of interest for a total of 18,120
probes, … In this study, we used a robust approach for quantitative spatial molecular profiling to …