[HTML][HTML] Structural and molecular kinetic features of activities of DNA polymerases

AA Kuznetsova, OS Fedorova… - International Journal of …, 2022 - mdpi.com
… of action of DNA polymerases. The structural features of different DNA polymerase families
are … conformational dynamics of DNA polymerases from all known polymerase families during …

A Well-Conserved Archaeal B-Family Polymerase Functions as an Extender in Translesion Synthesis

X Feng, B Zhang, Z Gao, R Xu, X Liu, S Ishino, M Feng… - Mbio, 2022 - Am Soc Microbiol
DNA polymerase once predicted to be an inactive form, is a bona fide … found that Dpo2 is
a robust DNA pol in nucleotide incorporation but is devoid of the 3′–5′ exonuclease activity

Structure and mechanism of B-family DNA polymerase ζ specialized for translesion DNA synthesis

…, R Jain, RE Johnson, L Prakash, S Prakash… - Nature structural & …, 2020 - nature.com
… This ring-like architecture is unique among multisubunit DNA polymerases and resembles
an uninterrupted daisy chain of protein–protein interactions, wherein Pol32 is the only subunit …

Bioorthogonal information storage in l-DNA with a high-fidelity mirror-image Pfu DNA polymerase

C Fan, Q Deng, TF Zhu - Nature Biotechnology, 2021 - nature.com
… ) DNA polymerase, which possesses the highest fidelity among known natural thermostable
DNA polymerases 23 and is … mass of Pfu DNA polymerase, at 90 kDa, is about twice that of …

Introducing a new bond-forming activity in an archaeal DNA polymerase by structure-guided enzyme redesign

T Aggarwal, WA Hansen, J Hong, A Ganguly… - ACS chemical …, 2022 - ACS Publications
… affect DNA polymerase activity. Both 9NN and 9N-NRQS displayed significantly reduced activity
for extending the canonical 3′-hydroxyl DNA … cause of the reduced DNA extension rate. …

Discovery, characterization, and structure-based optimization of small-molecule in vitro and in vivo probes for human DNA polymerase theta

…, ME Swarbrick, AP Turnbull, S Willis… - Journal of Medicinal …, 2022 - ACS Publications
… (10) We have previously shown that small-molecule inhibitors of the DNA polymerase
activity of Polθ not only elicit the synthetic lethality with BRCA genes previously predicted by …

The Mutant βE202K Sliding Clamp Protein Impairs DNA Polymerase III Replication Activity

…, MK Scotland, VMP Babu, S Chodavarapu… - Journal of …, 2021 - Am Soc Microbiol
… impedes growth by interfering with DNA replication. We hypothesized that the excess β clamp
sequesters the replicative DNA polymerase III (Pol III) to inhibit replication. As a test of this …

Substrate specificity and proposed structure of the proofreading complex of T7 DNA polymerase

TL Dangerfield, S Kirmizialtin, KA Johnson - Journal of Biological Chemistry, 2022 - ASBMB
… on the proofreading reaction for T7 DNA polymerase remains to be studied. … activity for T7
DNA polymerase, we performed single turnover rapid quench experiments with synthetic DNA

Specificity enhancement of deoxyribonucleic acid polymerization for sensitive nucleic acid detection

B Hu, Y Wang, S Sun, G Luo, S Zhang… - Analytical …, 2020 - ACS Publications
… Therefore, we have hypothesized that, by reducing the reaction rate of DNA polymerase at
the initiation and/or elongation steps, we can effectively enhance the priming accuracy and …

Construction of a highly error-prone DNA polymerase for developing organelle mutation systems

J Ji, A Day - Nucleic Acids Research, 2020 - academic.oup.com
… Removal of bacterial DNA polymerases by our purification regime was … DNA synthesis
observed using the Pol- protein, which lacks the DNA polymerisation domain responsible for DNA