Hybridization and genome duplication for early evolutionary success in the Asian Palmate group of Araliaceae

A Gallego‐Narbón, J Wen, J Liu… - … and Evolution, 2022 - Wiley Online Library
… a unique opportunity to unravel the evolutionary history of … Phylogenetic studies have
revealed three highly diversified … to analyze chromosome evolution across the Araliaceae tree

An updated explanation of ancestral karyotype changes and reconstruction of evolutionary trajectories to form Camelina sativa chromosomes

Z Zhang, F Meng, P Sun, J Yuan, K Gong, C Liu… - BMC genomics, 2020 - Springer
… The process involved 2 chromosome fusions. By the analysis of chromosome structure
and karyotype evolution, we found that sub-genomes Cs-G1 and Cs-G2 may share a closer …

Phylogenomic resolution of order-and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes

PR Timilsena, EK Wafula, CF Barrett… - Frontiers in Plant …, 2022 - frontiersin.org
… In this study, we use nuclear gene sequences to resolve phylogenetic relationships among
all … of CSC orthogroup representation in transcriptomes used in the phylogenetic analysis. …

A recent burst of gene duplications in Triticeae

X Wang, X Yan, Y Hu, L Qin, D Wang, J Jia, Y Jiao - Plant Communications, 2022 - cell.com
gene duplications from historical WGD events and those from recent small-scale duplications
(SSD), we performed self-genomic comparisons and classified the identified syntenic gene

Gene count from target sequence capture places three whole genome duplication events in Hibiscus L. (Malvaceae)

JS Eriksson, CD Bacon, DJ Bennett, BE Pfeil… - … Ecology and Evolution, 2021 - Springer
… 15% of all angiosperm speciation events are considered to … have received more attention
in phylogenetic studies [5, 8]. The … tree was generated to test amongst three genome evolution

A chromosome‐level genome of Syringa oblata provides new insights into chromosome formation in Oleaceae and evolutionary history of lilacs

Y Wang, L Lu, J Li, H Li, Y You, S Zang… - The Plant …, 2022 - Wiley Online Library
… , but also help unravel mechanisms … phylogenetic tree was constructed for 13 angiosperm
species and one outgroup, using 140 420 highly homologous amino acids from 325 low-copy

Hagfish genome elucidates vertebrate whole-genome duplication events and their evolutionary consequences

D Yu, Y Ren, M Uesaka, AJS Beavan… - … ecology & evolution, 2024 - nature.com
… the early events in cyclostome genome evolution, leveraging … vertebrate karyotype is
fundamental to unravel the timing of 2R 8… Taken together, our comprehensive phylogenetic

Dynamic genome evolution in a model fern

DB Marchant, G Chen, S Cai, F Chen, P Schafran… - Nature Plants, 2022 - nature.com
… Here we present a chromosomal genome assembly and … to those of angiosperms that serve
to mask WGD events. … genes based on a separate phylogenetic analysis of Type II genes (Fig…

Karyotype evolution of the Asterids insights from the first genome sequences of the family Cornaceae

C Dong, S Wang, H Zhang, J Liu, M Li - DNA Research, 2023 - academic.oup.com
… The genome size and chromosome number of angiosperms … contributors of genomic evolution.
Recurring ancient WGD … represent the gene investigation of this phylogenetic tree based …

Gene and genome duplications in the evolution of chemodiversity: perspectives from studies of Lamiaceae

BR Lichman, GT Godden, CR Buell - Current opinion in plant biology, 2020 - Elsevier
Angiosperm species with genome sequences reported by Ref. [83] are indicated with …
genome evolution and dynamics, including the origins of gene duplications [15] and gene clusters […