Rapid and assured genetic engineering methods applied to Acinetobacter baylyi ADP1 genome streamlining

…, KR Dugan, BA Renda, SP Leonard… - Nucleic Acids …, 2020 - academic.oup.com
… leveraged to perform targeted mutagenesis and disruption of … ACIAD0135, by transforming
an OE-PCR product containing the … in the strains we created could be combined in future work …

Engineering Acinetobacter baylyi ADP1: New tools and strategies for enhanced production of chemicals using non-conventional substrates

J Luo - 2022 - trepo.tuni.fi
… be created through primers with polymerase chain reaction (PCR). The DNA … strain to
validate their causality. The process can be laborious, especially when there is a large mutation

Development of a genetic toolset for the highly engineerable and metabolically versatile Acinetobacter baylyi ADP1

BW Biggs, SR Bedore, E Arvay, S Huang… - Nucleic Acids …, 2020 - academic.oup.com
… created using the above natural transformation workflow. A single set of mutagenic primers
was … These insulators were added by successive PCR mutagenesis via overhangs to create …

Metabolic expansion in Acinetobacter baylyi ADP1 for enhanced aromatic compound catabolism

SR Bedore - 2021 - search.proquest.com
… exceptional efficiency of natural transformation and allelic replacement in ADP1, an ideal …
This new strain, ADP1-ISx, demonstrated reduced mutation rates and higher transformation

Characterization of highly ferulate-tolerant Acinetobacter baylyi ADP1 isolates by a rapid reverse engineering method

J Luo, EA McIntyre, SR Bedore, V Santala… - Applied and …, 2022 - Am Soc Microbiol
… Its high efficiency of natural transformation and allelic … by direct addition of the purified
PCR product to the exponentially … Although the mutation-transformed cells could be directly …

Natural transformation as a tool in Acinetobacter baylyi: Streamlined engineering and mutational analysis

SR Bedore, EL Neidle, I Pardo, J Luo, AC Baugh… - Methods in …, 2023 - Elsevier
… For example, although we tout the plasticity of strain ADP1 and … carrying a known mutation
from the evolved strain, were … -transformation of different mutated alleles, each PCR product …

Natural transformation as a tool in Acinetobacter baylyi: Evolution by amplification of gene copy number

I Pardo, SR Bedore, MP Tumen-Velasquez… - Methods in …, 2023 - Elsevier
… , the natural competency of Acinetobacter baylyi ADP1 facilitated … a beneficial mutation
(white star). A second beneficial … of the GOI may occur during PCR or transformation. Therefore, …

[HTML][HTML] The mismatch repair system (mutS and mutL) in Acinetobacter baylyi ADP1

H Zhou, L Zhang, Q Xu, L Zhang, Y Yu, X Hua - BMC microbiology, 2020 - Springer
… A PCR fragment containing the cat gene which conferred … introduced into XH440 by natural
transformation (Fig. 1a). The A. … The mutation rates of four strains were shown in Table 2 and …

Gene amplification, laboratory evolution, and biosensor screening reveal MucK as a terephthalic acid transporter in Acinetobacter baylyi ADP1

I Pardo, RK Jha, RE Bermel, F Bratti, M Gaddis… - Metabolic …, 2020 - Elsevier
… amplified by PCR and fused tail-to-head by overlap extension PCR (see … baylyi mutants
were naturally transformed with plasmids … Another mutation identified in the parent-strain IP148 …

Utilization of cellulosic vinasse with Acinetobacter baylyi ADP1

I Laaksonen - 2022 - trepo.tuni.fi
transformation as one of the paired cells can be transformed … the strains characteristic
frequency of natural transformation. … for the PCR are shown in Table 9 and the PCR program is …