Accurate reconstruction of bacterial pan-and core genomes with PEPPAN
… be used for assignments of bacterial strains to populations. … recombination, and large-scale
gene insertions and deletions. … Pangenome pipelines must be efficient in order to handle the …
gene insertions and deletions. … Pangenome pipelines must be efficient in order to handle the …
[PDF][PDF] Accurate reconstruction of the pan-and core-genomes of bacteria with PEPPA
… recombination with DNA from unrelated strains, the insertion by … of modern, large-scale
comparative genomics. Roary (Page et … Comparative analysis of Salmonella genomes identifies a …
comparative genomics. Roary (Page et … Comparative analysis of Salmonella genomes identifies a …
Comparative genomics and pangenome-oriented studies reveal high homogeneity of the agronomically relevant enterobacterial plant pathogen Dickeya solani
A Motyka-Pomagruk, S Zoledowska, AE Misztak… - BMC genomics, 2020 - Springer
… either occupy isolated ecological niches or lack efficient mechanisms for gene exchange and
… report on a large-scale genome-wide evolutionary study involving 22 D. solani strains. In …
… report on a large-scale genome-wide evolutionary study involving 22 D. solani strains. In …
High-Resolution Typing of Staphylococcus epidermidis Based on Core Genome Multilocus Sequence Typing To Investigate the Hospital Spread of Multidrug …
A Jamet, J Guglielmini, B Brancotte… - Journal of Clinical …, 2021 - Am Soc Microbiol
… , an effective tool for international strain comparison is still lacking. … strain (RefSeq accession
number GCF_000007645) as a reference. The pipeline’s first step relies on the eCAMBer …
number GCF_000007645) as a reference. The pipeline’s first step relies on the eCAMBer …
Evolutionary pan-genomics and applications
BK Tiwary - Pan-genomics: Applications, Challenges, and Future …, 2020 - Elsevier
… CAMBer can identify multigene families and mutations in a variety of bacterial strains but
does not provide evolutionary analysis … of many species is not yet resolved and large-scale …
does not provide evolutionary analysis … of many species is not yet resolved and large-scale …
Pan-genomics of plants and its applications
… An analogous analysis performed on five strains of … whole genomes allowing the large-scale
genomes sequencing projects for … The examination of crop pan-genomes aims at effectively …
genomes sequencing projects for … The examination of crop pan-genomes aims at effectively …
… -dose nebulized colistin methanesulfonate and the role in hospital-acquired pneumonia caused by Gram-negative bacteria with difficult-to-treat resistance: a review
… outcomes must be proven in large-scale trials to lead to the … -resistant strain group, contrary
to the sensitive strain group that … dose administrated in the nebulized camber was 7 MIU, and …
to the sensitive strain group that … dose administrated in the nebulized camber was 7 MIU, and …
[PDF][PDF] Comparative characterization of bio-aerosol nebulizers in connection to atmospheric simulation chambers
SG Danelli, M Brunoldi, D Massabò, F Parodi… - pdfs.semanticscholar.org
… ASCs, which are small to large-scale facilities (with volumes … : 10 cm) placed inside the
camber to collect the bacteria by a … of experiments with pathogenic strains. With each specific set…
camber to collect the bacteria by a … of experiments with pathogenic strains. With each specific set…
Technical difficulties of mixed culture driven waste biomass-based biohydrogen production: Sustainability of current pretreatment techniques and future prospective
… achieve higher efficiency and competitive hydrogen production … , especially, methanogenic
bacteria must be suppressed or … remains unclear for a large-scale application in the cases of …
bacteria must be suppressed or … remains unclear for a large-scale application in the cases of …
Microbial carbon-capture cells for wastewater treatment: a step towards environmental sustainability
… This demonstrated the clearance of cathode camber’s … A comparative study on the power
output of ceramic type small … for large-scale applications, also proving that mixed strain cultures …
output of ceramic type small … for large-scale applications, also proving that mixed strain cultures …