Chloroplast genome variation and phylogenetic relationships of Atractylodes species

Y Wang, S Wang, Y Liu, Q Yuan, J Sun, L Guo - BMC genomics, 2021 - Springer
… In this study, we used the plastome sequences to assess the phylogenetic relationships
within Atractylodes. The results indicate the presence of the deep phylogenetic relationships in …

Plastomes of eight Ligusticum species: characterization, genome evolution, and phylogenetic relationships

T Ren, ZX Li, DF Xie, LJ Gui, C Peng, J Wen, XJ He - BMC Plant Biology, 2020 - Springer
… Therefore, we prefer to use the plastomes to infer the phylogenetic relationships for … of
phylogenetic relationships, we also used nuclear ITS sequences to construct the phylogenetic tree…

The Complete Chloroplast Genome Sequences of 14 Curcuma Species: Insights Into Genome Evolution and Phylogenetic Relationships Within Zingiberales

H Liang, Y Zhang, J Deng, G Gao, C Ding… - Frontiers in …, 2020 - frontiersin.org
… However, lack of chloroplast genomic information severely hinders our understanding of …
and phylogenetic relationships. In this study, the complete chloroplast (cp) genomes of fourteen …

Complete chloroplast genome sequence of Barleria prionitis, comparative chloroplast genomics and phylogenetic relationships among Acanthoideae

DA Alzahrani, SS Yaradua, EJ Albokhari, A Abba - BMC genomics, 2020 - Springer
… cp genome contents are widely used by researchers as a tool to investigate phylogenetic
relationship and in genomic … among taxa that their phylogenetic relationships are unresolved. …

Genome sequences of three Aegilops species of the section Sitopsis reveal phylogenetic relationships and provide resources for wheat improvement

R Avni, T Lux, A Minz‐Dub, E Millet, H Sela… - The Plant …, 2022 - Wiley Online Library
genomes, analyse their genomic distribution (Figure 1f), and study their phylogenetic
relationships in … To identify the NLR complement in the different genomes, we: (i) searched the …

Comparative Analysis of the Complete Chloroplast Genomes in Allium Subgenus Cyathophora (Amaryllidaceae): Phylogenetic Relationship and Adaptive Evolution

X Yang, DF Xie, JP Chen, SD Zhou… - BioMed research …, 2020 - Wiley Online Library
Phylogenetic analysis depended on the complete chloroplast genome (CCG), and the intergenic
spacer … We have well resolved the phylogenetic relationship of species in the subgenus …

… analyses of chloroplast genomes from 13 Lagerstroemia (Lythraceae) species: identification of highly divergent regions and inference of phylogenetic relationships

G Zheng, L Wei, L Ma, Z Wu, C Gu, K Chen - Plant molecular biology, 2020 - Springer
genome organization, repeats, divergence hotspots, genome evolution and phylogenetic
relationships … Our goals for this study were as follows: (i) compare the global structures within …

Reconstructing phylogenetic relationships based on repeat sequence similarities

D Vitales, S Garcia, S Dodsworth - Molecular Phylogenetics and Evolution, 2020 - Elsevier
… in relation to the percentage of genome representation, we rerun the analyses subsampling
10%, 25%, 50% and 75% of the reads from Nicotiana dataset; (iii) To evaluate the effect of …

Structure, function, regulation and phylogenetic relationship of ZIP family transporters of plants

TP Ajeesh Krishna, T Maharajan… - Frontiers in Plant …, 2020 - frontiersin.org
structure, mechanism and phylogenetic relationships of plant ZIP transporters. We provided
insight into the structure … The identification and characterization of the ZIP gene family are still …

The complete chloroplast genome sequence of yellow mustard (Sinapis alba L.) and its phylogenetic relationship to other Brassicaceae species

X Du, T Zeng, Q Feng, L Hu, X Luo, Q Weng, J He… - Gene, 2020 - Elsevier
… Thus, understanding the phylogenetic relationships between S. alba and … phylogenetic
relationships among Brassicaceae species, we downloaded a total of 81 complete cp genomes