Improved prediction of protein-protein interactions using AlphaFold2
… of protein–protein interactions can be divided into two categories, the identification of what
proteins interact and the identification … multiple models of the same protein–protein interaction …
proteins interact and the identification … multiple models of the same protein–protein interaction …
A deep-learning framework for multi-level peptide–protein interaction prediction
… in peptide-protein interaction prediction and identification of … are two mainstream approaches
for protein–ligand interaction … sequence information to model the interactions. For example, …
for protein–ligand interaction … sequence information to model the interactions. For example, …
Reliable identification of protein-protein interactions by crosslinking mass spectrometry
… Protein-protein interactions govern most cellular pathways and processes, and multiple …
Assessing the error of interaction networks has been a challenge. Crosslinking mass …
Assessing the error of interaction networks has been a challenge. Crosslinking mass …
De novo design of protein interactions with learned surface fingerprints
… of molecular recognition, we introduce a protein design … fully buried patches of the interface
to drive protein interactions. … side of the interaction could consist of one or multiple chains (for …
to drive protein interactions. … side of the interaction could consist of one or multiple chains (for …
[HTML][HTML] Biomechanical characterization of SARS-CoV-2 spike RBD and human ACE2 protein-protein interaction
… The RBD-ACE2 interaction is a crucial step to mediate the host cell … interaction with the
SARS-CoV-2 S protein has a higher affinity than its binding with the structurally identical S protein …
SARS-CoV-2 S protein has a higher affinity than its binding with the structurally identical S protein …
Recent advances in the development of protein–protein interactions modulators: mechanisms and clinical trials
H Lu, Q Zhou, J He, Z Jiang, C Peng, R Tong… - Signal transduction and …, 2020 - nature.com
… However, HTS has been proved to be useful in the identification of molecules at the initial …
the hydrophobic interaction is the major interaction force between the two proteins. The key …
the hydrophobic interaction is the major interaction force between the two proteins. The key …
Fast end-to-end learning on protein surfaces
… approach, we test it on two tasks in the field of protein structural bioinformatics: the identification
of interaction sites and the prediction of protein-protein interactions. On both tasks, we …
of interaction sites and the prediction of protein-protein interactions. On both tasks, we …
Cross-linking mass spectrometry for investigating protein conformations and protein–protein interactions─ a method for all seasons
L Piersimoni, PL Kastritis, C Arlt, A Sinz - Chemical Reviews, 2021 - ACS Publications
… linker, between two functional groups in a protein or a protein complex. The … interactions,
as well as analysis of structural dynamics of proteins in their native state, including identification …
as well as analysis of structural dynamics of proteins in their native state, including identification …
Graph-based prediction of protein-protein interactions with attributed signed graph embedding
… ) [4] and mass spectrometric protein complex identification (MS-PCI) [5], … As the whole
interaction network is regarded as an … there exists an interaction between the two proteins, in our S-…
interaction network is regarded as an … there exists an interaction between the two proteins, in our S-…
Lipid–protein and protein–protein interactions in the pulmonary surfactant system and their role in lung homeostasis
O Cañadas, B Olmeda, A Alonso… - International journal of …, 2020 - mdpi.com
… interactions within lung surfactant and how multiple lipid–protein and protein–protein
interactions … cellular inflammatory response via interaction with pattern-recognition receptors and …
interactions … cellular inflammatory response via interaction with pattern-recognition receptors and …
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