A PLATFORM TO AID SELECT THE OPTIMAL TOOL TO DESIGN GUIDE RNAS.

Y Qianqian, MA Lei - Frontiers of Agricultural Science & …, 2023 - search.ebscohost.com
CRISPR-mediated gene-editing technology has arguably driven an unprecedented
revolution in biological sciences for its role in elucidating gene functions. A multitude of …

[PDF][PDF] A PLATFORM TO AID SELECT THE OPTIMAL TOOL TO DESIGN GUIDE RNAS

Q YANG, L MA - 2022 - scholar.archive.org
ABSTRACT CRISPR-mediated gene-editing technology has arguably driven an
unprecedented revolution in biological sciences for its role in elucidating gene functions. A …

A quick guide to CRISPR sgRNA design tools

VA Brazelton Jr, S Zarecor, DA Wright, Y Wang… - GM crops & …, 2015 - Taylor & Francis
Targeted genome editing is now possible in nearly any organism and is widely
acknowledged as a biotech game-changer. Among available gene editing techniques, the …

Application of bioinformatics tools in CRISPR/Cas

S Choudhary, A Ubale, J Padiya… - CRISPR/Cas Genome …, 2020 - Springer
Clustered regularly interspaced short palindromic repeats (CRISPR) target sequence
selection is a key step for achieving successful targeted gene editing. Possible off-target …

CRISPR-P 2.0: an improved CRISPR-Cas9 tool for genome editing in plants

H Liu, Y Ding, Y Zhou, W Jin, K Xie, LL Chen - Molecular plant, 2017 - cell.com
The clustered regularly interspaced short palindromic repeat (CRISPR)-CRISPR-associated
protein 9 (CRISPR-Cas9) system has emerged as a versatile molecular tool for genome …

An overview of designing and selection of sgRNAs for precise genome editing by the CRISPR-Cas9 system in plants

AP Uniyal, K Mansotra, SK Yadav, V Kumar - 3 Biotech, 2019 - Springer
A large number of computational tools have been documented in recent years for
identification of target-specific valid single-guide (sg) RNAs (18–20 nucleotide long …

Advances in guide RNA design for editing plant genomes using CRISPR-Cas systems

K Chen, H Liu, K Xie, MT ul Qamar… - Genome editing for …, 2021 - taylorfrancis.com
This chapter discusses the general rules for selecting target sites for genome editing using
the Clustered regularly interspaced short palindromic repeats (CRISPR)-Cas technology …

Computational Tools and Approaches for CRISPR/Cas Technology

H Shah, A Manzoor, A Dar - CRISPR/Cas-Mediated Genome …, 2023 - taylorfrancis.com
The CRISPR/Cas endonuclease system, generally used as a defense mechanism in
bacteria and archaea against invading phages, has emerged as a potential editing tool in …

CRISPR-ERA: a webserver for guide RNA design of gene editing and regulation

H Liu, X Wang - Computational Methods in Synthetic Biology, 2021 - Springer
The CRISPR/Cas9 system has been developed as a powerful technology for both targeted
genome editing and gene regulation. However, the design of efficient single-guide RNAs …

Cloud-based design of short guide RNA (sgRNA) libraries for CRISPR experiments

F Heigwer, M Boutros - CRISPR Guide RNA Design: Methods and …, 2021 - Springer
CRISPR/Cas-based genome editing in any biological application requires the evaluation of
suitable genomic target sites to design efficient reagents. Considerations for the design of …