Repressive chromatin modification underpins the long-term expression trend of a perennial flowering gene in nature

H Nishio, DM Buzas, AJ Nagano, K Iwayama… - Nature …, 2020 - nature.com
Natural environments require organisms to possess robust mechanisms allowing responses
to seasonal trends. In Arabidopsis halleri, the flowering regulator AhgFLC shows …

Seasonal plasticity and diel stability of H3K27me3 in natural fluctuating environments

H Nishio, AJ Nagano, T Ito, Y Suzuki, H Kudoh - Nature Plants, 2020 - nature.com
Diel and seasonal oscillations are two major environmental changes in nature. While
organisms cope with the former by the well-characterized mechanism of the circadian clock …

Combinatorial functions of diverse histone methylations in Arabidopsis thaliana flowering time regulation

S Shafiq, A Berr, WH Shen - New Phytologist, 2014 - Wiley Online Library
Previous studies in A rabidopsis thaliana have identified several histone methylation
enzymes, including ARABIDOPSIS TRITHORAX1 (ATX 1)/SET DOMAIN GROUP 27 (SDG …

Evolutionarily conserved histone methylation dynamics during seed life-cycle transitions

K Müller, D Bouyer, A Schnittger, AR Kermode - PLoS One, 2012 - journals.plos.org
Plants have a remarkable ability to react to seasonal changes by synchronizing life-cycle
transitions with environmental conditions. We addressed the question of how transcriptional …

From the laboratory to the field: assaying histone methylation at FLOWERING LOCUS C in naturally growing Arabidopsis halleri

H Nishio, DM Buzas, AJ Nagano, Y Suzuki… - Genes & Genetic …, 2016 - jstage.jst.go.jp
Gene regulatory mechanisms are often defined in studies performed in the laboratory but
are seldom validated for natural habitat conditions, ie, in natura. Vernalization, the promotion …

The chromatin remodelers PKL and PIE1 act in an epigenetic pathway that determines H3K27me3 homeostasis in Arabidopsis

B Carter, B Bishop, KK Ho, R Huang, W Jia… - The Plant …, 2018 - academic.oup.com
Selective, tissue-specific gene expression is facilitated by the epigenetic modification
H3K27me3 (trimethylation of lysine 27 on histone H3) in plants and animals. Much remains …

Growth habit determination by the balance of histone methylation activities in Arabidopsis

JH Ko, I Mitina, Y Tamada, Y Hyun, Y Choi… - The EMBO …, 2010 - embopress.org
In Arabidopsis, the rapid‐flowering summer‐annual versus the vernalization‐requiring
winter‐annual growth habit is determined by natural variation in FRIGIDA (FRI) and …

Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36

Z Zhao, Y Yu, D Meyer, C Wu, WH Shen - Nature cell biology, 2005 - nature.com
Flowering represents a crucial transition from a vegetative to a reproductive phase of the
plant life cycle. Despite extensive studies, the molecular mechanisms controlling flowering …

Dynamics of H3K4me3 Chromatin Marks Prevails over H3K27me3 for Gene Regulation during Flower Morphogenesis in Arabidopsis thaliana

J Engelhorn, R Blanvillain, C Kröner, H Parrinello… - Epigenomes, 2017 - mdpi.com
Plant life-long organogenesis involves sequential, time and tissue specific expression of
developmental genes. This requires activities of Polycomb Group (PcG) and trithorax Group …

Beyond heat waves: Unlocking epigenetic heat stress memory in Arabidopsis

H Nishio, T Kawakatsu, N Yamaguchi - Plant Physiology, 2024 - academic.oup.com
Plants remember their exposure to environmental changes and respond more effectively the
next time they encounter a similar change by flexibly altering gene expression. Epigenetic …