Transposable elements in a clade of three tetraploids and a diploid relative, focusing on Gypsy amplification
M Piednoël, A Sousa, SS Renner - Mobile DNA, 2015 - Springer
Background Polyploidization can activate specific transposable elements, leading to their
accumulation. At the same time, the preferential loss of repetitive elements in polyploids may …
accumulation. At the same time, the preferential loss of repetitive elements in polyploids may …
Daidara: A gigantic Gypsy LTR retrotransposon lineage in the springtail Allacma fusca genome
KK Kojima - Genes to Cells, 2023 - Wiley Online Library
Long terminal repeat (LTR) retrotransposons are the major contributor to genome size
expansion, as in the cases of the maize genome or the axolotl genome. Despite their impact …
expansion, as in the cases of the maize genome or the axolotl genome. Despite their impact …
Chromosomal distribution and evolution of abundant retrotransposons in plants: gypsy elements in diploid and polyploid Brachiaria forage grasses
Like other eukaryotes, the nuclear genome of plants consists of DNA with a small proportion
of low-copy DNA (genes and regulatory sequences) and very abundant DNA sequence …
of low-copy DNA (genes and regulatory sequences) and very abundant DNA sequence …
A deep-branching clade of retrovirus-like retrotransposons in bdelloid rotifers
EA Gladyshev, M Meselson, IR Arkhipova - Gene, 2007 - Elsevier
Rotifers of class Bdelloidea, a group of aquatic invertebrates in which males and meiosis
have never been documented, are also unusual in their lack of multicopy LINE-like and …
have never been documented, are also unusual in their lack of multicopy LINE-like and …
Quantification and organization of WIS2-1A and BARE-1 retrotransposons in different genomes of Triticum and Aegilops species
MA Pagnotta, L Mondini, E Porceddu - Molecular Genetics and Genomics, 2009 - Springer
A real-time PCR approach was adopted and optimized to estimate and compare, through a
relative quantification, the copy number of WIS2-1A and BARE-1 retrotransposons. The aim …
relative quantification, the copy number of WIS2-1A and BARE-1 retrotransposons. The aim …
IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques
R Kalendar, T Grob, M Regina, A Suoniemi… - Theoretical and Applied …, 1999 - Springer
The BARE-1 retrotransposon is an active, dispersed, and highly abundant component of the
genome of barley (Hordeum vulgare) and other species in its genus. Like all …
genome of barley (Hordeum vulgare) and other species in its genus. Like all …
Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct …
Although copia retrotransposons are major components of all plant genomes, the
evolutionary relationships between individual copia families and between elements from …
evolutionary relationships between individual copia families and between elements from …
A new gypsy-type retrotransposon, RIRE7: preferential insertion into the tandem repeat sequence TrsD in pericentromeric heterochromatin regions of rice …
N Kumekawa, N Ohmido, K Fukui, E Ohtsubo… - Molecular Genetics and …, 2001 - Springer
A portion of an insertion sequence present in a member of the RIRE3 family of
retrotransposons in Oryza sativa L. cv. IR36 was found to have an LTR sequence followed …
retrotransposons in Oryza sativa L. cv. IR36 was found to have an LTR sequence followed …
Isolation and characterisation of Ty1-copia retrotransposons from Pongamia pinnata
RG Shelke, L Rangan - Trees, 2019 - Springer
Key message This manuscript mainly deals about the diversity and transcriptional activity of
Ty1-copia in Pongamia genome. Abstract Pongamia pinnata, a leguminous tree, is popularly …
Ty1-copia in Pongamia genome. Abstract Pongamia pinnata, a leguminous tree, is popularly …
GalEa retrotransposons from galatheid squat lobsters (Decapoda, Anomura) define a new clade of Ty1/copia-like elements restricted to aquatic species
Y Terrat, E Bonnivard, D Higuet - Molecular Genetics and Genomics, 2008 - Springer
Crustacean species have not been examined in great detail for their transposable elements
content. Here we focus on galatheid crabs, which are one of the most diverse and …
content. Here we focus on galatheid crabs, which are one of the most diverse and …