The Sordariomycetes: an expanding resource with Big Data for mining in evolutionary genomics and transcriptomics

Z Wang, W Kim, YW Wang, E Yakubovich… - Frontiers in Fungal …, 2023 - frontiersin.org
Advances in genomics and transcriptomics accompanying the rapid accumulation of omics
data have provided new tools that have transformed and expanded the traditional concepts …

Gearing up for comparative genomics: analyses of the fungal class Dothideomycetes

SB Goodwin, GHJ Kema - New Phytologist, 2009 - JSTOR
The Fungal Genetics Conferences, held biannually on the grounds of the Asilomar
Conference Center in Pacific Grove, CA, USA, are the premier gatherings for fungal …

Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic …

TA de Menezes, FF Aburjaile, G Quintanilha-Peixoto… - Journal of Fungi, 2023 - mdpi.com
Ophiocordyceps australis (Ascomycota, Hypocreales, Ophiocordycipitaceae) is a classic
entomopathogenic fungus that parasitizes ants (Hymenoptera, Ponerinae, Ponerini) …

A class-wide phylogenetic assessment of Dothideomycetes

CL Schoch, PW Crous, JZ Groenewald… - Studies in …, 2009 - ingentaconnect.com
We present a comprehensive phylogeny derived from 5 genes, nucSSU, nucLSU rDNA,
TEF1, RPB1 and RPB2, for 356 isolates and 41 families (six newly described in this volume) …

High-Quality Genome Assembly and Annotation Resource of Botryosphaeria dothidea Strain BDLA16-7, Causing Trunk Canker Disease on Chinese Hickory

J Bao, Q Wu, J Huang, CQ Zhang - Plant Disease, 2022 - Am Phytopath Society
Botryosphaeria dothidea is a latent pathogen with global importance to woody plant health,
which causes serious tree trunk cankers on Chinese hickory. To date, only one Illumina …

Conservation of putative transcription factor binding sites of co-expressed Plasmopara halstedii genes in two Phytophthora species

S Bharti, M Thines - Mycological Progress, 2023 - Springer
Oomycetes, a large group of fungus-like organisms, include some destructive plant
pathogens causing enormous economic damage. Phylogenetically, oomycetes belong to …

[HTML][HTML] Overview of genomic and bioinformatic resources for Zymoseptoria tritici

A Testa, R Oliver, J Hane - Fungal Genetics and Biology, 2015 - Elsevier
Zymoseptoria tritici (syn. Mycosphaerella graminicola, Septoria tritici) is a haploid fungus
belonging to the class Dothideomycetes. It is the causal agent of septoria leaf blotch–one of …

Comparative Genome and Transcriptome Study of the Gene Expression Difference Between Pathogenic and Environmental Strains of Prototheca zopfii

X Zeng, T Kudinha, F Kong, Q Zhang - Frontiers in microbiology, 2019 - frontiersin.org
Prototheca zopfii commonly exists in the environment, and causes invasive infections
(protothecosis) in humans. The morbidity of protothecosis has increased rapidly in recent …

Families in Botryosphaeriales: a phylogenetic, morphological and evolutionary perspective

AJL Phillips, KD Hyde, A Alves, JK Liu - Fungal diversity, 2019 - Springer
Botryosphaeriales was introduced in 2006 for a single family Botryosphaeriaceae. Since
then the number of families has increased as a result of the transfer of one family …

Multiple gene genealogies and phenotypic data reveal cryptic species of the Botryosphaeriaceae: a case study on the Neofusicoccum parvum/N. ribis complex

D Pavlic, B Slippers, TA Coutinho… - Molecular Phylogenetics …, 2009 - Elsevier
Neofusicoccum parvum and N. ribis (Botryosphaeriaceae, Ascomycetes) are closely related,
plant pathogenic fungi with a world-wide distribution on a wide range of woody hosts …