Genomic DNA sequences have both deterministic and random aspects and exhibit features
at numerous scales, from codons to regions of conserved or divergent gene order. Genomic …

Genomes have both deterministic and random aspects, with the underlying DNA sequences
exhibiting features at numerous scales, from codons to regions of conserved or divergent …

Genomes have both deterministic and random aspects, with the underlying DNA sequences
exhibiting features at numerous scales, from codons to regions of conserved or divergent …

Genomes have both deterministic and random aspects, with the underlying DNA sequences
exhibiting features at numerous scales, from codons and cis-elements through genes and …

Abstract Motivation In 2012, Iqbal et al. introduced the colored de Bruijn graph, a variant of
the classic de Bruijn graph, which is aimed at 'detecting and genotyping simple and complex …

The improvements in DNA sequence technologies have increased the volume and speed at
which genomic data is acquired. Nevertheless, due to the difficulties for completely …

The khmer package is a freely available software library for working efficiently with fixed
length DNA words, or k-mers. khmer provides implementations of a probabilistic k-mer …

Abstract Iqbal et al.(Nature Genetics, 2012) introduced the colored de Bruijn graph, a variant
of the classic de Bruijn graph, which is aimed at “detecting and genotyping simple and …

The nodes of a de Bruijn graph (DBG) of order k correspond to the set of k-mers occurring in
a set of reads and an edge is added between two nodes if there is ak− 1 length overlap …

How to apply de Bruijn graphs to genome assembly | Nature Biotechnology Skip to main
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