Structural variation in cancer: role, prevalence, and mechanisms
MR Cosenza, B Rodriguez-Martin… - Annual Review of …, 2022 - annualreviews.org
Somatic rearrangements resulting in genomic structural variation drive malignant
phenotypes by altering the expression or function of cancer genes. Pan-cancer studies have …
phenotypes by altering the expression or function of cancer genes. Pan-cancer studies have …
Structural mutations in cancer: mechanistic and functional insights
K Inaki, ET Liu - Trends in Genetics, 2012 - cell.com
Next-generation sequencing (NGS) has enabled the comprehensive and precise
identification of many somatic structural mutations in cancer. Analyses integrating point …
identification of many somatic structural mutations in cancer. Analyses integrating point …
Somatic structural variation and cancer
JMC Tubio - Briefings in functional genomics, 2015 - academic.oup.com
With the advent of next-generation sequencing technologies, we have witnessed a rapid
pace of discovery of new patterns of somatic structural variation in cancer genomes, and an …
pace of discovery of new patterns of somatic structural variation in cancer genomes, and an …
Unravelling the tumour genome: The evolutionary and clinical impacts of structural variants in tumourigenesis
Structural variants (SVs) represent a major source of aberration in tumour genomes. Given
the diversity in the size and type of SVs present in tumours, the accurate detection and …
the diversity in the size and type of SVs present in tumours, the accurate detection and …
Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers
B Alaei-Mahabadi, J Bhadury… - Proceedings of the …, 2016 - National Acad Sciences
Tumor genomes are mosaics of somatic structural variants (SVs) that may contribute to the
activation of oncogenes or inactivation of tumor suppressors, for example, by altering gene …
activation of oncogenes or inactivation of tumor suppressors, for example, by altering gene …
[PDF][PDF] When genome maintenance goes badly awry
EM Kass, ME Moynahan, M Jasin - Molecular cell, 2016 - cell.com
Genetic abnormalities are present in all tumor types, although the frequency and type can
vary. Chromosome abnormalities include highly aberrant structures, particularly …
vary. Chromosome abnormalities include highly aberrant structures, particularly …
[PDF][PDF] A pan-cancer compendium of genes deregulated by somatic genomic rearrangement across more than 1,400 cases
Y Zhang, L Yang, M Kucherlapati, F Chen… - Cell reports, 2018 - cell.com
A systematic cataloging of genes affected by genomic rearrangement, using multiple patient
cohorts and cancer types, can provide insight into cancer-relevant alterations outside of …
cohorts and cancer types, can provide insight into cancer-relevant alterations outside of …
Mechanisms underlying mutational signatures in human cancers
The collective somatic mutations observed in a cancer are the outcome of multiple
mutagenic processes that have been operative over the lifetime of a patient. Each process …
mutagenic processes that have been operative over the lifetime of a patient. Each process …
Structural variations in cancer and the 3D genome
F Dubois, N Sidiropoulos, J Weischenfeldt… - Nature Reviews …, 2022 - nature.com
Structural variations (SVs) affect more of the cancer genome than any other type of somatic
genetic alteration but difficulties in detecting and interpreting them have limited our …
genetic alteration but difficulties in detecting and interpreting them have limited our …
High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations
The impact of somatic structural variants (SVs) on gene expression in cancer is largely
unknown. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes …
unknown. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes …