Phylogenomics and evolution of secondary metabolism in plant-associated fungi
JW Spatafora, KE Bushley - Current opinion in plant biology, 2015 - Elsevier
Highlights•Secondary metabolites are small, bioactive molecules that function in fungal
ecology.•Genomic sequencing has revealed greater diversity of secondary metabolite …
ecology.•Genomic sequencing has revealed greater diversity of secondary metabolite …
An overview of genomics, phylogenomics and proteomics approaches in Ascomycota
L Muggia, CG Ametrano, K Sterflinger, D Tesei - Life, 2020 - mdpi.com
Fungi are among the most successful eukaryotes on Earth: they have evolved strategies to
survive in the most diverse environments and stressful conditions and have been selected …
survive in the most diverse environments and stressful conditions and have been selected …
Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus
Nuclei of arbuscular endomycorrhizal fungi have been described as highly diverse due to
their asexual nature and absence of a single cell stage with only one nucleus. This has …
their asexual nature and absence of a single cell stage with only one nucleus. This has …
[HTML][HTML] Whole-genome sequencing and analysis of the white-rot fungus Ceriporia lacerata reveals its phylogenetic status and the genetic basis of lignocellulose …
Ceriporia lacerata is an endophytic white-rot fungus that has lignocellulolytic and terpenoid-
biosynthetic abilities. However, little is known about the genomic architecture of this fungus …
biosynthetic abilities. However, little is known about the genomic architecture of this fungus …
Endophytic fungi, occurrence, and metabolites
MV Tejesvi, AM Pirttilä - Physiology and Genetics: Selected Basic and …, 2018 - Springer
Great progress has been made in the recent years in the endophytic fungal research. The
classification and definition of endophytes have been revisited, as the complex community …
classification and definition of endophytes have been revisited, as the complex community …
Characterization of the mating type (MAT) locus in the Phialocephala fortinii sl–Acephala applanata species complex
PL Zaffarano, A Duò, CR Grünig - Fungal Genetics and Biology, 2010 - Elsevier
Members of the Phialocephala fortinii sensu lato–Acephala applanata species complex
(PAC) are the dominant root endophytes of woody plants in temperate and boreal forests. In …
(PAC) are the dominant root endophytes of woody plants in temperate and boreal forests. In …
Hidden fungi: Combining culture-dependent and-independent DNA barcoding reveals inter-plant variation in species richness of endophytic root fungi in Elymus …
AK Høyer, TR Hodkinson - Journal of Fungi, 2021 - mdpi.com
The root endophyte community of the grass species Elymus repens was investigated using
both a culture-dependent approach and a direct amplicon sequencing method across five …
both a culture-dependent approach and a direct amplicon sequencing method across five …
Hybrid genome assembly and annotation of Paenibacillus pasadenensis strain R16 reveals insights on endophytic life style and antifungal activity
A Passera, L Marcolungo, P Casati, M Brasca… - PLoS …, 2018 - journals.plos.org
Bacteria of the Paenibacillus genus are becoming important in many fields of science,
including agriculture, for their positive effects on the health of plants. However, there are little …
including agriculture, for their positive effects on the health of plants. However, there are little …
Metagenome sequence of E laphomyces granulatus from sporocarp tissue reveals A scomycota ectomycorrhizal fingerprints of genome expansion and a P …
Many obligate symbiotic fungi are difficult to maintain in culture, and there is a growing need
for alternative approaches to obtaining tissue and subsequent genomic assemblies from …
for alternative approaches to obtaining tissue and subsequent genomic assemblies from …
Translating phytobiomes from theory to practice: ecological and evolutionary considerations
The tremendous potential of the plant microbiome to improve plant growth and production
means that microbes are in the process of becoming an everyday tool in agronomic …
means that microbes are in the process of becoming an everyday tool in agronomic …