Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein

A Davidson, K Patora-Komisarska… - Nucleic acids …, 2011 - academic.oup.com
The pharmacological disruption of the interaction between the HIV Tat protein and its
cognate transactivation response RNA (TAR) would generate novel anti-viral drugs with a …

Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein

A Davidson, TC Leeper… - Proceedings of the …, 2009 - National Acad Sciences
The interaction of the HIV-1 transactivator protein Tat with its transactivation response (TAR)
RNA is an essential step in viral replication and therefore an attractive target for developing …

Selective binding of TAR RNA by a Tat-derived β-peptide

MA Gelman, S Richter, H Cao, N Umezawa… - Organic …, 2003 - ACS Publications
The interaction between the HIV-1 Tat protein and the TAR RNA element in the nascent viral
genomic transcript is required for viral replication. An 11-residue β-peptide (1), an all-β …

The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein

F Aboul-ela, J Karn, G Varani - Journal of molecular biology, 1995 - Elsevier
The human immunodeficiency virus type-1 (HIV-1) Tat protein stimulates transcriptional
elongation. Tat is introduced to the transcription machinery by binding to the transactivation …

An inhibitor of the Tat/TAR RNA interaction that effectively suppresses HIV-1 replication

F Hamy, ER Felder, G Heizmann… - Proceedings of the …, 1997 - National Acad Sciences
One of the first steps in HIV gene expression is the recruitment of Tat protein to the
transcription machinery after its binding to the RNA response element TAR. Starting from a …

Interaction of human immunodeficiency virus type 1 Tat-derived peptides with TAR RNA

KS Long, DM Crothers - Biochemistry, 1995 - ACS Publications
Revised Manuscript Received May 8, 1995® abstract: Basic peptides from the carboxy
terminus of the human immunodeficiency virus type 1 (HIV-1) Tat protein bind to the stem …

TAR-RNA binding by HIV-1 Tat protein is selectively inhibited by its L -enantiomer

A Garbesi, F Hamy, M Maffini, G Albrecht… - Nucleic acids …, 1998 - academic.oup.com
An oligoribonucleotide, corresponding to the Tat-interactive top half of the HIV-1 TAR RNA
stem-loop, was synthesized in both the natural d-and the enantiomeric l-configurations. The …

Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge

F Aboul-ela, J Karn, G Varani - Nucleic acids research, 1996 - academic.oup.com
Efficient transcription from the human immunodeficiency virus (HIV) promoter depends on
binding of the viral regulatory protein Tat to a cis-acting RNA regulatory element, TAR. Tat …

High affinity binding of TAR RNA by the human immunodeficiency virus type-1 tat protein requires base-pairs in the RNA stem and amino acid residues flanking the …

MJ Churcher, C Lamont, F Hamy, C Dingwall… - Journal of molecular …, 1993 - Elsevier
The binding site for tat protein on TAR RNA has been defined in quantitative terms using an
extensive series of mutations. The relative dissociation constants for the mutant TAR RNAs …

Site-specific cross-linking of amino acids in the basic region of human immunodeficiency virus type 1 Tat peptide to chemically modified TAR RNA duplexes

MA Farrow, F Aboul-ela, D Owen, A Karpeisky… - Biochemistry, 1998 - ACS Publications
The Human Immunodeficiency Virus type 1 Tat protein interacts specifically with a U-rich
bulge within an RNA stem− loop known as the trans-activation responsive region (TAR) that …