Near-Chromosome-Level Genome Assembly of the Dark Septate Endophyte Laburnicola rhizohalophila: A Model for Investigating Root-Fungus Symbiosis

X He, Z Yuan - Genome Biology and Evolution, 2021 - academic.oup.com
The novel DSE Laburnicola rhizohalophila (Pleosporales, Ascomycota) is frequently found
in the halophytic seepweed (Suaeda salsa). In this article, we report a near-chromosome …

Hybrid Genome Assembly and Gene Repertoire of the Root Endophyte Clitopilus hobsonii QYL-10 (Entolomataceae, Agaricales, Basidiomycetes)

L Peng, X Shan, Y Wang, F Martin… - Molecular Plant …, 2021 - Am Phytopath Society
Clitopilus hobsonii (Entolomataceae, Agaricales, Basidiomycetes) is a common soil
saprotroph. There is also evidence that C. hobsonii can act as a root endophyte benefitting …

[HTML][HTML] Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

M Schlegel, M Münsterkötter, U Güldener… - BMC genomics, 2016 - Springer
Background Whereas an increasing number of pathogenic and mutualistic ascomycetous
species were sequenced in the past decade, species showing a seemingly neutral …

Whole-Genome Sequence Resource of Fusarium oxysporum Strain TH15, a Plant Growth Promoting Endophytic Fungus Isolated from Tetrastigma hemsleyanum

X Huang, Z Zeng, Z Chen, Y Yang, J Pang… - …, 2022 - Am Phytopath Society
Endophytes are microbes, including bacteria, fungi, and actinomycetes, that live sym-
biotically inside tissues of their host plants without substantively harming them ( Kaul et al …

[HTML][HTML] Genome mining of Streptomyces scabrisporus NF3 reveals symbiotic features including genes related to plant interactions

CD Ceapă, M Vazquez-Hernandez… - PLoS …, 2018 - journals.plos.org
Endophytic bacteria are wide-spread and associated with plant physiological benefits, yet
their genomes and secondary metabolites remain largely unidentified. In this study, we …

Tapping Culture Collections for Fungal Endophytes: First Genome Assemblies for Three Genera and Five Species in the Ascomycota

R Hill, Q Levicky, F Pitsillides… - Genome Biology and …, 2023 - academic.oup.com
The Ascomycota form the largest phylum in the fungal kingdom and show a wide diversity of
lifestyles, some involving associations with plants. Genomic data are available for many …

Enrichment of root endophytic bacteria from Populus deltoides and single-cell-genomics analysis

SM Utturkar, WN Cude, MS Robeson Jr… - Applied and …, 2016 - Am Soc Microbiol
Bacterial endophytes that colonize Populus trees contribute to nutrient acquisition, prime
immunity responses, and directly or indirectly increase both above-and below-ground …

The Chromosome-Scale Genome Resource for Two Endophytic Fusarium species, F. culmorum and F. pseudograminearum

X Shan, Y Zhu, R Redman… - Molecular Plant …, 2021 - Am Phytopath Society
Genus Fusarium (Ascomycota, Hypocreales, Nectriaceae) includes many economically
important plant pathogens that cause devastating diseases of a wide range of crops and …

[HTML][HTML] Illumina-based analysis yields new insights into the diversity and composition of endophytic fungi in cultivated Huperzia serrata

S Fan, L Miao, H Li, A Lin, F Song, P Zhang - PLoS One, 2020 - journals.plos.org
Endophytic fungi play an important role in plant growth. The composition and structure of
endophytes vary in different plant tissues, which are specific habitats for endophyte …

[HTML][HTML] Genome and secretome analysis of jute endophyte Grammothele lineata strain SDL-CO-2015-1: Insights into its lignocellulolytic structure and secondary …

T Ehsan, RN Reza, A Das, O Ahmed, AKMA Baten… - Genomics, 2020 - Elsevier
Grammothele lineata strain SDL-CO-2015-1, jute (Corchorus olitorius) endophyte has been
reported to produce anti-cancer drug paclitaxel in culture condition. Here we investigated …