[HTML][HTML] Plant-microbial endophytes interactions: scrutinizing their beneficial mechanisms from genomic explorations

M del Carmen Orozco-Mosqueda, G Santoyo - Current Plant Biology, 2021 - Elsevier
The study of plant-endophyte interactions is complex and difficult to decipher. In part, this is
because they are dynamic and diverse; these interactions can be mutualistic …

Screening for broad-spectrum antimicrobial endophytes from Rosa roxburghii and multi-omic analyses of biosynthetic capacity

H Zhang, MF Yang, Q Zhang, B Yan… - Frontiers in Plant …, 2022 - frontiersin.org
Plants with certain medicinal values are a good source for isolating function-specific
endophytes. Rosa roxburghii Tratt. has been reported to be a botanical source of …

Visual comparative omics of fungi for plant biomass deconstruction

S Miyauchi, D Navarro, IV Grigoriev, A Lipzen… - Frontiers in …, 2016 - frontiersin.org
Wood-decay fungi contain the cellular mechanisms to decompose such plant cell wall
components as cellulose, hemicellulose, and lignin. A multi-omics approach to the …

Complete Genome Sequence of the Metabolically Versatile Plant Growth-Promoting Endophyte Variovorax paradoxus S110

JI Han, HK Choi, SW Lee, PM Orwin, J Kim… - Journal of …, 2011 - Am Soc Microbiol
Variovorax paradoxus is a microorganism of special interest due to its diverse metabolic
capabilities, including the biodegradation of both biogenic compounds and anthropogenic …

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

A Levasseur, A Lomascolo, O Chabrol… - BMC genomics, 2014 - Springer
Background Saprophytic filamentous fungi are ubiquitous micro-organisms that play an
essential role in photosynthetic carbon recycling. The wood-decayer Pycnoporus …

Rhizophagus proliferus genome sequence reiterates conservation of genetic traits in AM fungi, but predicts higher saprotrophic activity

PP Singh, D Srivastava, S Shukla, Varsha - Archives of Microbiology, 2022 - Springer
Arbuscular mycorrhizal (AM) fungi are ubiquitous endosymbionts of terrestrial plants. It helps
plants to extract more nutrients from the soil and enhances the plant tolerance to various …

Seventeen Ustilaginaceae high-quality genome sequences allow phylogenomic analysis and provide insights into secondary metabolite synthesis

L Ullmann, D Wibberg, T Busche, C Rückert… - Journal of fungi, 2022 - mdpi.com
The family of Ustilaginaceae belongs to the order of Basidiomycetes. Despite their plant
pathogenicity causing, eg, corn smut disease, they are also known as natural producers of …

Draft Genome Resources for Plant-Beneficial Fungi Clonostachys rosea Strains ACM941 and 88-710

ZA Demissie, KA Robinson… - Molecular Plant-Microbe …, 2021 - Am Phytopath Society
Clonostachys rosea strains ACM941 and 88-710 are beneficial microbes recognized for
their plant disease control and growth promotion properties, respectively, when applied to …

Genome Re-Annotation and Transcriptome Analyses of Sanghuangporus sanghuang

ZQ Shen, JH Jiang, CT Li, Y Li, LW Zhou - Journal of Fungi, 2023 - mdpi.com
Sanghuangporus sanghuang, the generic type of Sanghuangporus belonging to
Hymenochaetaceae, is a precious medicinal wood-inhabiting macrofungus with high …

Near-gapless genome and transcriptome analyses provide insights into fruiting body development in Lentinula edodes

N Shen, H Xie, K Liu, X Li, L Wang, Y Deng… - International Journal of …, 2024 - Elsevier
Fruiting body development in macrofungi is an intensive research subject. In this study, high-
quality genomes were assembled for two sexually compatible monokaryons from a …