Phylogenomic conflict resulting from ancient introgression following species diversification in Stewartia sl (Theaceae)
HY Lin, YJ Hao, JH Li, CX Fu, PS Soltis… - Molecular Phylogenetics …, 2019 - Elsevier
Phylogenetic analyses using diverse datasets can yield conflicting inference of evolutionary
history. Phylogenetic conflicts observed in both animal and plant systems have often been …
history. Phylogenetic conflicts observed in both animal and plant systems have often been …
Circumscription and biogeographic patterns in the Eastern North American-East Asian genus Stewartia (Theaceae: Stewartieae): insight from chloroplast and nuclear …
LM Prince - Castanea, 2002 - JSTOR
Stewartia is a genus of approximately 26 species which are frequently divided into two
subgenera or genera based on the leaf duration. All evergreen species (= Hartia) are found …
subgenera or genera based on the leaf duration. All evergreen species (= Hartia) are found …
Phylotranscriptomics of Theaceae: generic-level relationships, reticulation and whole-genome duplication
Abstract Background and Aims Theaceae, with three tribes, nine genera and more than 200
species, are of great economic and ecological importance. Recent phylogenetic analyses …
species, are of great economic and ecological importance. Recent phylogenetic analyses …
Phytogeographic history of the tea family inferred through high-resolution phylogeny and fossils
The tea family (Theaceae) has a highly unusual amphi-Pacific disjunct distribution: most
extant species in the family are restricted to subtropical evergreen broadleaf forests in East …
extant species in the family are restricted to subtropical evergreen broadleaf forests in East …
[HTML][HTML] Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
Background The use of transcriptomic and genomic datasets for phylogenetic reconstruction
has become increasingly common as researchers attempt to resolve recalcitrant nodes with …
has become increasingly common as researchers attempt to resolve recalcitrant nodes with …
Disentangling sources of gene tree discordance in phylogenomic data sets: testing ancient hybridizations in Amaranthaceae sl
DF Morales-Briones, G Kadereit, DT Tefarikis… - Systematic …, 2021 - academic.oup.com
Gene tree discordance in large genomic data sets can be caused by evolutionary processes
such as incomplete lineage sorting and hybridization, as well as model violation, and errors …
such as incomplete lineage sorting and hybridization, as well as model violation, and errors …
A consensus phylogenomic approach highlights paleopolyploid and rapid radiation in the history of Ericales
Premise Large genomic data sets offer the promise of resolving historically recalcitrant
species relationships. However, different methodologies can yield conflicting results …
species relationships. However, different methodologies can yield conflicting results …
Artifactual orthologs and the need for diligent data exploration in complex phylogenomic datasets: a museomic case study from the Andean flora
LA Frost, AM Bedoya, LP Lagomarsino - Systematic Biology, 2024 - academic.oup.com
The Andes mountains of western South America are a globally important biodiversity
hotspot, yet there is a paucity of resolved phylogenies for plant clades from this region …
hotspot, yet there is a paucity of resolved phylogenies for plant clades from this region …
Integrating coalescent‐based species delimitation with ecological niche modeling delimited two species within the Stewartia sinensis complex (Theaceae)
HY Lin, KJ Gu, WH Li, YP Zhao - Journal of Systematics and …, 2022 - Wiley Online Library
Accurate species delimitation is the key to precise estimation of species diversity and is
fundamental to most branches of biology. Unclear species boundaries within species …
fundamental to most branches of biology. Unclear species boundaries within species …
Phylogenomic insights into the temporal-spatial divergence history, evolution of leaf habit and hybridization in Stachyurus (Stachyuraceae)
Abstract Stachyuraceae, an East Asian endemic family of shrubs or small trees, comprises a
single genus, Stachyurus (c. 11 spp.). Despite previous extensive studies based on both …
single genus, Stachyurus (c. 11 spp.). Despite previous extensive studies based on both …