Characterization of MHC ligands for peptide based tumor vaccination

F Klug, M Miller, HH Schmidt… - Current pharmaceutical …, 2009 - ingentaconnect.com
Short peptides derived from cellular proteins may escape complete destruction during
protein catabolism and finally serve as a showcase in the immune system. Exposed at the …

High-resolution profiling of MHC II peptide presentation capacity reveals SARS-CoV-2 CD4 T cell targets and mechanisms of immune escape

FJ Obermair, F Renoux, S Heer, CH Lee… - Science …, 2022 - science.org
Understanding peptide presentation by specific MHC alleles is fundamental for controlling
physiological functions of T cells and harnessing them for therapeutic use. However …

High‐throughput identification of conditional MHCI ligands and scaled‐up production of conditional MHCI complexes

M Darwish, S Wichner, J Li, JC Chang, C Tam… - Protein …, 2021 - Wiley Online Library
Despite the need to monitor the impact of Cancer Immunotherapy (CI)/Immuno‐Oncology
(IO) therapeutics on neoantigen‐specific T‐cell responses, very few clinical programs …

T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide–MHC complexes

AK Bentzen, L Such, KK Jensen, AM Marquard… - Nature …, 2018 - nature.com
The promiscuous nature of T-cell receptors (TCRs) allows T cells to recognize a large variety
of pathogens, but makes it challenging to understand and control T-cell recognition. Existing …

[HTML][HTML] PANDORA v2. 0: Benchmarking peptide-MHC II models and software improvements

FM Parizi, DF Marzella, G Ramakrishnan… - Frontiers in …, 2023 - frontiersin.org
T-cell specificity to differentiate between self and non-self relies on T-cell receptor (TCR)
recognition of peptides presented by the Major Histocompatibility Complex (MHC) …

Geometrical characterization of T cell receptor binding modes reveals class‐specific binding to maximize access to antigen

NK Singh, ET Abualrous, CM Ayres… - Proteins: Structure …, 2020 - Wiley Online Library
Recognition of antigenic peptides bound to major histocompatibility complex (MHC) proteins
by αβ T cell receptors (TCRs) is a hallmark of T cell mediated immunity. Recent data suggest …

Prospective identification of cross-reactive human peptide-MHC ligands for T cell receptor based therapies

RS Gejman, MG Klatt, A Chang, HF Jones, CY Oh… - BioRxiv, 2018 - biorxiv.org
T cell receptor (TCR)-based therapeutic cells and agents (eg adoptive T cell,, TCR-
engineered T cells, ImmTACs, TCR mimic antibodies, neoantigen vaccines,) have emerged …

[HTML][HTML] The basis for limited specificity and MHC restriction in a T cell receptor interface

KH Piepenbrink, SJ Blevins, DR Scott… - Nature …, 2013 - nature.com
Abstract αβ T cell receptors (TCRs) recognize peptides presented by major
histocompatibility complex (MHC) proteins using multiple complementarity-determining …

Large-scale characterization of peptide-MHC binding landscapes with structural simulations

C Yanover, P Bradley - Proceedings of the National …, 2011 - National Acad Sciences
Class I major histocompatibility complex proteins play a critical role in the adaptive immune
system by binding to peptides derived from cytosolic proteins and presenting them on the …

[HTML][HTML] The energetic basis underpinning T-cell receptor recognition of a super-bulged peptide bound to a major histocompatibility complex class I molecule

YC Liu, Z Chen, SR Burrows, AW Purcell… - Journal of Biological …, 2012 - ASBMB
Although the major histocompatibility complex class I (MHC-I) molecules typically bind short
peptide (p) fragments (8–10 amino acids in length), longer," bulged" peptides are often be …