Genome wide annotation and characterization of young, intact long terminal repeat retrotransposons (In-LTR-RTs) of seven legume species
PK Jayaswal, A Shanker, NK Singh - Genetica, 2020 - Springer
Availability of genome sequence of different legume species has provided an opportunity to
characterize the abundance, distribution, and divergence of canonical intact long terminal …
characterize the abundance, distribution, and divergence of canonical intact long terminal …
A comprehensive annotation dataset of intact LTR retrotransposons of 300 plant genomes
LTR retrotransposons (LTR-RTs) are ubiquitous and represent the dominant repeat element
in plant genomes, playing important roles in functional variation, genome plasticity and …
in plant genomes, playing important roles in functional variation, genome plasticity and …
LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice
H Wang, JS Liu - BMC genomics, 2008 - Springer
Background Long terminal repeat retrotransposons (LTR elements) are ubiquitous
Eukaryotic TEs that transpose through RNA intermediates. Accounting for significant …
Eukaryotic TEs that transpose through RNA intermediates. Accounting for significant …
LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice.
WH Wang Hao, LJS Liu JinSong - 2008 - cabidigitallibrary.org
Background: Long terminal repeat retrotransposons (LTR elements) are ubiquitous
Eukaryotic TEs that transpose through RNA intermediates. Accounting for significant …
Eukaryotic TEs that transpose through RNA intermediates. Accounting for significant …
High nucleotide similarity of three Copia lineage LTR retrotransposons among plant genomes
S Orozco-Arias, M Dupeyron, D Gutiérrez-Duque… - …, 2023 - cdnsciencepub.com
Transposable elements (TEs) are mobile elements found in the majority of eukaryotic
genomes. TEs deeply impact the structure and evolution of chromosomes and can induce …
genomes. TEs deeply impact the structure and evolution of chromosomes and can induce …
Genome-wide survey and comparative analysis of LTR retrotransposons and their captured genes in rice and sorghum
SY Jiang, S Ramachandran - PLoS One, 2013 - journals.plos.org
Long terminal repeat (LTR) retrotransposons are the major class I mobile elements in plants.
They play crucial roles in gene expansion, diversification and evolution. However, their …
They play crucial roles in gene expansion, diversification and evolution. However, their …
Long terminal repeat retrotransposons of Oryza sativa
EM McCarthy, J Liu, G Lizhi, JF McDonald - Genome biology, 2002 - Springer
Background Long terminal repeat (LTR) retrotransposons constitute a major fraction of the
genomes of higher plants. For example, retrotransposons comprise more than 50% of the …
genomes of higher plants. For example, retrotransposons comprise more than 50% of the …
LTRtype, an efficient tool to characterize structurally complex LTR retrotransposons and nested insertions on genomes
FC Zeng, YJ Zhao, QJ Zhang, LZ Gao - Frontiers in plant science, 2017 - frontiersin.org
The amplification and recombination of long terminal repeat (LTR) retrotransposons have
proven to determine the size, organization, function, and evolution of most host genomes …
proven to determine the size, organization, function, and evolution of most host genomes …
Obtaining retrotransposon sequences, analysis of their genomic distribution and use of retrotransposon-derived genetic markers in lentil (Lens culinaris Medik.)
R Rey-Banos, LE Saenz de Miera, P Garcia… - PloS one, 2017 - journals.plos.org
Retrotransposons with long terminal repeats (LTR-RTs) are widespread mobile elements in
eukaryotic genomes. We obtained a total of 81 partial LTR-RT sequences from lentil …
eukaryotic genomes. We obtained a total of 81 partial LTR-RT sequences from lentil …
Look4LTRs: a Long terminal repeat retrotransposon detection tool capable of cross species studies and discovering recently nested repeats
Plant genomes include large numbers of transposable elements. One particular type of
these elements is flanked by two Long Terminal Repeats (LTRs) and can translocate using …
these elements is flanked by two Long Terminal Repeats (LTRs) and can translocate using …
相关搜索
- ltr rts legume species
- ltr rts repeat retrotransposons
- repeat retrotransposons legume species
- repeat retrotransposons oryza sativa
- ltr retrotransposons plant genomes
- ltr retrotransposons annotation dataset
- ltr retrotransposons element classification
- ltr retrotransposons phylogenetic relationships
- ltr retrotransposons rice and sorghum
- ltr retrotransposons efficient tool
- plant genomes annotation dataset
- element classification phylogenetic relationships