Complete chloroplast genomes and comparative analysis of Ligustrum species

L Long, Y Li, S Wang, Z Liu, J Wang, M Yang - Scientific Reports, 2023 - nature.com
In this study, we assembled and annotated the chloroplast (cp) genomes of four Ligustrum
species, L. sinense, L. obtusifolium, L. vicaryi, and L. ovalifolium 'Aureum'. Including six other …

Complete Chloroplast Genomes of Vachellia nilotica and Senegalia senegal: Comparative Genomics and Phylogenomic Placement in a New Generic System

S Asaf, A Khan, AL Khan, A Al-Harrasi, A Al-Rawahi - PLoS One, 2019 - journals.plos.org
Vachellia and Senegalia are the most important genera in the subfamily Mimosoideae
(Fabaceae). Recently, species from both genera were separated from the long …

The Complete Chloroplast Genome Sequence of the Medicinal Plant Salvia miltiorrhiza

J Qian, J Song, H Gao, Y Zhu, J Xu, X Pang, H Yao… - PloS one, 2013 - journals.plos.org
Salvia miltiorrhiza is an important medicinal plant with great economic and medicinal value.
The complete chloroplast (cp) genome sequence of Salvia miltiorrhiza, the first sequenced …

Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta)

K Fučíková, LA Lewis, PO Lewis - Data in brief, 2016 - data-in-brief.com
The chloroplast genomes of green algae are highly variable in their architecture. In this
article we summarize gene content across newly obtained and published chloroplast …

Evolutionary directions of single nucleotide substitutions and structural mutations in the chloroplast genomes of the family Calycanthaceae

W Dong, C Xu, J Wen, S Zhou - BMC Evolutionary Biology, 2020 - Springer
Background Chloroplast genome sequence data is very useful in studying/addressing the
phylogeny of plants at various taxonomic ranks. However, there are no empirical …

Chloroplast Genome Evolution in Actinidiaceae: clpP Loss, Heterogenous Divergence and Phylogenomic Practice

WC Wang, SY Chen, XZ Zhang - PLoS One, 2016 - journals.plos.org
Actinidiaceae is a well-known economically important plant family in asterids. To elucidate
the chloroplast (cp) genome evolution within this family, here we present complete genomes …

Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs

T Zhang, CX Zeng, JB Yang, HT Li… - Journal of Systematics …, 2016 - Wiley Online Library
Chloroplast genome information helps improve the phylogenetic resolution and can act as
organelle‐scale barcodes in recently radiated plant groups. Previously we reported that nine …

Complete chloroplast genome sequencing of five Salix species and its application in the phylogeny and taxonomy of the genus

J Zhou, Z Jiao, J Guo, B Wang, J Zheng - Mitochondrial DNA Part B, 2021 - Taylor & Francis
In this study, whole chloroplast genomes of five Salix species (S. argyracea, S. dasyclados,
S. eriocephala, S. integra 'Hakuro Nishiki', and S. suchowensis) were sequenced. These …

Analysis of Chloroplast Genomes Provides Insights Into the Evolution of Agropyron

H Han, R Qiu, Y Liu, X Zhou, C Gao, Y Pang… - Frontiers in …, 2022 - frontiersin.org
Plants of the Agropyron genus are important pasture resources, and they also play important
roles in the ecological restoration. Chloroplast genomes are inherited from maternal parents …

Complete chloroplast genome sequences of four Allium species: comparative and phylogenetic analyses

YM Huo, LM Gao, BJ Liu, YY Yang, SP Kong, YQ Sun… - Scientific reports, 2019 - nature.com
The genus Allium is one of the largest monocotyledonous genera, containing over 850
species, and most of these species are found in temperate climates of the Northern …