Plastome evolution in the Caesalpinia group (Leguminosae) and its application in phylogenomics and populations genetics

P Aecyo, A Marques, B Huettel, A Silva, T Esposito… - Planta, 2021 - Springer
Main conclusion The chloroplast genomes of Caesalpinia group species are structurally
conserved, but sequence level variation is useful for both phylogenomic and population …

Comparative Chloroplast Genomics at Low Taxonomic Levels: A Case Study Using Amphilophium (Bignonieae, Bignoniaceae)

VA Thode, LG Lohmann - Frontiers in plant science, 2019 - frontiersin.org
Chloroplast (cp) genome organization, gene order, and content have long been considered
conserved among land plants. Despite that, the generation of thousands of complete …

Calophyllaceae plastomes, their structure and insights in relationships within the clusioids

RJ Trad, FN Cabral, V Bittrich, SR Silva, MCE Amaral - Scientific reports, 2021 - nature.com
A complete chloroplast genome is not yet available for numerous species of plants. Among
the groups that lack plastome information is the clusioid clade (Malpighiales), which …

Plastid genome structure and phylogenomics of Nymphaeales: conserved gene order and new insights into relationships

M Gruenstaeudl, L Nauheimer, T Borsch - Plant systematics and evolution, 2017 - Springer
The plastid genomes of early-diverging angiosperms were among the first land plant
plastomes investigated. Despite their importance to understanding angiosperm evolution, no …

Structural variation of the complete chloroplast genome and plastid phylogenomics of the genus Asteropyrum (Ranunculaceae)

J He, M Yao, RD Lyu, LL Lin, HJ Liu, LY Pei, SX Yan… - Scientific reports, 2019 - nature.com
Two complete chloroplast genome sequences of Asteropyrum, as well as those of 25 other
species from Ranunculaceae, were assembled using both Illumina and Sanger sequencing …

Plastid genome data provide new insights into the dynamic evolution of the tribe Ampelopsideae (Vitaceae)

L Zhang, Y Meng, D Wang, GH He, JM Zhang, J Wen… - BMC genomics, 2024 - Springer
Abstract Background Ampelopsideae J. Wen & ZL Nie is a small-sized tribe of Vitaceae
Juss., including ca. 47 species from four genera showing a disjunct distribution worldwide …

The complete chloroplast genome of Onobrychis gaubae (Fabaceae-Papilionoideae): comparative analysis with related IR-lacking clade species

M Moghaddam, A Ohta, M Shimizu, R Terauchi… - BMC Plant …, 2022 - Springer
Abstract Background Plastome (Plastid genome) sequences provide valuable markers for
surveying evolutionary relationships and population genetics of plant species …

The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding …

GE Martin, M Rousseau-Gueutin, S Cordonnier… - Annals of …, 2014 - academic.oup.com
Background and Aims To date chloroplast genomes are available only for members of the
non-protein amino acid-accumulating clade (NPAAA) Papilionoid lineages in the legume …

Plastid genomes provide insights into the phylogeny and chloroplast evolution of the paper daisy tribe Gnaphalieae (Asteraceae)

XL Lao, Y Meng, J Wu, J Wen, ZL Nie - Gene, 2024 - Elsevier
Chloroplast genomes, as an essential source of phylogenetic information, are increasingly
utilized in the evolutionary study of angiosperms. Gnaphalieae is a medium-sized tribe of the …

Complete plastid genomes from Ophioglossum californicum, Psilotum nudum, and Equisetum hyemale reveal an ancestral land plant genome structure and resolve …

F Grewe, W Guo, EA Gubbels, AK Hansen… - BMC Evolutionary …, 2013 - Springer
Background Plastid genome structure and content is remarkably conserved in land plants.
This widespread conservation has facilitated taxon-rich phylogenetic analyses that have …