[HTML][HTML] funRNA: a fungi-centered genomics platform for genes encoding key components of RNAi
Background RNA interference (RNAi) is involved in genome defense as well as diverse
cellular, developmental, and physiological processes. Key components of RNAi are …
cellular, developmental, and physiological processes. Key components of RNAi are …
[HTML][HTML] Intragenomic variation in nuclear ribosomal markers and its implication in species delimitation, identification and barcoding in fungi
Intragenomic variation is the molecular variation within the genome among repetitive DNA.
As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal …
As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal …
[HTML][HTML] Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus
Nuclei of arbuscular endomycorrhizal fungi have been described as highly diverse due to
their asexual nature and absence of a single cell stage with only one nucleus. This has …
their asexual nature and absence of a single cell stage with only one nucleus. This has …
Comprehensive investigation of long non-coding RNAs in an endophytic fungus Calcarisporium arbuscula NRRL 3705
CF Sun, Y Guo, A Kataria, S Annamalai, K Malik… - Archives of …, 2023 - Springer
Long non-coding RNAs (lncRNAs) play an important role in eukaryotic cells. However, there
is no report of lncRNAs in endophytic fungi Calcarisporium arbuscula. Here, in …
is no report of lncRNAs in endophytic fungi Calcarisporium arbuscula. Here, in …
[HTML][HTML] In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of de novo Genome Assemblies
M Montoliu-Nerin, M Sánchez-García… - Frontiers in fungal …, 2021 - frontiersin.org
Morphological characters and nuclear ribosomal DNA (rDNA) phylogenies have so far been
the basis of the current classifications of arbuscular mycorrhizal (AM) fungi. Improved …
the basis of the current classifications of arbuscular mycorrhizal (AM) fungi. Improved …
PacBio sequencing of Glomeromycota rDNA: a novel amplicon covering all widely used ribosomal barcoding regions and its applicability in taxonomy and ecology of …
Z Kolaříková, R Slavíková, C Krüger, M Krüger… - New …, 2021 - Wiley Online Library
There is no consensus barcoding region for determination of arbuscular mycorrhizal fungal
(AMF) taxa. To overcome this obstacle, we have developed an approach to sequence an …
(AMF) taxa. To overcome this obstacle, we have developed an approach to sequence an …
Methods to estimate the proportion of plant and fungal RNA in an arbuscular mycorrhiza
IE Maldonado-Mendoza, GR Dewbre, ML Van Buuren… - Mycorrhiza, 2002 - Springer
Arbuscular mycorrhizas are endosymbiotic associations formed between obligately
biotrophic arbuscular mycorrhizal (AM) fungi and plant roots. The fungus and plant coexist in …
biotrophic arbuscular mycorrhizal (AM) fungi and plant roots. The fungus and plant coexist in …
[HTML][HTML] Widespread polycistronic transcripts in fungi revealed by single-molecule mRNA sequencing
Genes in prokaryotic genomes are often arranged into clusters and co-transcribed into
polycistronic RNAs. Isolated examples of polycistronic RNAs were also reported in some …
polycistronic RNAs. Isolated examples of polycistronic RNAs were also reported in some …
[HTML][HTML] Genome-wide profiling of long non-coding RNA of the rice blast fungus Magnaporthe oryzae during infection
Abstract Background Long non-coding RNAs (lncRNAs) play essential roles in
developmental processes and disease development at the transcriptional and post …
developmental processes and disease development at the transcriptional and post …
Genome-wide analysis of small RNAs in the rice blast fungus, Magnaporthe oryzae
이현준 - 2023 - s-space.snu.ac.kr
RNA interference (RNAi) is a conserved mechanism suppressing gene expression mediated
by small RNA (sRNA). sRNA guides RNA-induced silencing complex (RISC) to target mRNA …
by small RNA (sRNA). sRNA guides RNA-induced silencing complex (RISC) to target mRNA …