Lost in translation: population genomics and long-read sequencing reveals relaxation of concerted evolution of the ribosomal DNA cistron
K Tremble, LM Suz, BTM Dentinger - Molecular phylogenetics and evolution, 2020 - Elsevier
Concerted evolution of the ribosomal DNA array has been studied in numerous eukaryotic
taxa, yet is still poorly understood. rDNA genes are repeated dozens to hundreds of times in …
taxa, yet is still poorly understood. rDNA genes are repeated dozens to hundreds of times in …
Genome diversity in arbuscular mycorrhizal fungi
JPW Young - Current Opinion in Plant Biology, 2015 - Elsevier
Highlights•In arbuscular mycorrhizal fungi, multiple nuclei share a common
cytoplasm.•There can be genomic diversity among the nuclei in an isolate.•Changes in …
cytoplasm.•There can be genomic diversity among the nuclei in an isolate.•Changes in …
Purifying Selection and Persistent Polymorphism among Nuclei in the Multinucleate Arbuscular Mycorrhizal (AM) Fungi
D Manyara, M Sánchez-García, MH Thorén… - bioRxiv, 2023 - biorxiv.org
Arbuscular mycorrhizal (AM) fungi form obligate symbiosis with the roots of the majority of
land plants and are found in all terrestrial ecosystems. The source and structure of genetic …
land plants and are found in all terrestrial ecosystems. The source and structure of genetic …
A Genome-Wide Prediction and Identification of Intergenic Small RNAs by Comparative Analysis in Mesorhizobium huakuii 7653R
X Fuli, Z Wenlong, W Xiao, Z Jing, H Baohai… - Frontiers in …, 2017 - frontiersin.org
In bacteria, small non-coding RNAs (sRNAs) are critical regulators of cellular adaptation to
changes in metabolism, physiology, or the external environment. In the last decade, more …
changes in metabolism, physiology, or the external environment. In the last decade, more …
Evolution of a large ribosomal RNA multigene family in filamentous fungi: birth and death of a concerted evolution paradigm
In eukaryotes, the primary components of the ribosome are encoded by multicopy nuclear
ribosomal RNA (rRNA) genes: 28/26S, 18S, 5.8 S, and 5S. Copies of these genes are …
ribosomal RNA (rRNA) genes: 28/26S, 18S, 5.8 S, and 5S. Copies of these genes are …
[HTML][HTML] Plant‐driven genome selection of arbuscular mycorrhizal fungi
Arbuscular mycorrhizal (AM) fungi belong to the order Glomeromycota and arguably form
the most successful symbiosis in plants. This is a very ancient symbiosis which originated …
the most successful symbiosis in plants. This is a very ancient symbiosis which originated …
Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis
J Van Creij, B Auxier, J An, RY Wijfjes, C Bergin… - BMC genomics, 2023 - Springer
Background Arbuscular mycorrhizal (AM) fungi are arguably the most important symbionts of
plants, offering a range of benefits to their hosts. However, the provisioning of these benefits …
plants, offering a range of benefits to their hosts. However, the provisioning of these benefits …
Unlinked rRNA genes are widespread among bacteria and archaea
Ribosomes are essential to cellular life and the genes for their RNA components are the
most conserved and transcribed genes in bacteria and archaea. Ribosomal RNA genes are …
most conserved and transcribed genes in bacteria and archaea. Ribosomal RNA genes are …
Discovery of interaction-related sRNAs and their targets in the Brachypodium distachyon and Magnaporthe oryzae pathosystem
Microbial pathogens secrete small RNA (sRNA) effectors into plant hosts to aid infection by
silencing transcripts of immunity and signaling-related genes through RNA interference …
silencing transcripts of immunity and signaling-related genes through RNA interference …
Genome-wide analysis of small RNAs in the wheat pathogenic fungus Zymoseptoria tritici
F Yang - Fungal biology, 2015 - Elsevier
Small non-coding RNAs constitute a large family of regulatory molecules with diverse
function. Knowledge about small RNAs in fungi remains limited. Here, a RNA-seq-based …
function. Knowledge about small RNAs in fungi remains limited. Here, a RNA-seq-based …