An ultra-high affinity ligand of HIV-1 TAR reveals the RNA structure recognized by P-TEFb

MD Shortridge, PT Wille, AN Jones… - Nucleic acids …, 2019 - academic.oup.com
The HIV-1 trans-activator protein Tat binds the trans-activation response element (TAR) to
facilitate recruitment of the super elongation complex (SEC) to enhance transcription of the …

New, extended hairpin form of the TAR-2 RNA domain points to the structural polymorphism at the 5′ end of the HIV-2 leader RNA

K Pachulska-Wieczorek, KJ Purzycka… - Nucleic acids …, 2006 - academic.oup.com
Abstract The HIV-2 TAR RNA domain (TAR-2) plays a key role in the trans-activation of HIV-
2 transcription as it is the target for the Tat-2 protein and several cell factors. Here, we show …

Structure of HIV TAR in complex with a Lab-Evolved RRM provides insight into duplex RNA recognition and synthesis of a constrained peptide that impairs …

IA Belashov, DW Crawford, CE Cavender… - Nucleic acids …, 2018 - academic.oup.com
Natural and lab-evolved proteins often recognize their RNA partners with exquisite affinity.
Structural analysis of such complexes can offer valuable insight into sequence-selective …

[引用][C] Structure and Function of HIV TAR RNA

JD Puglisi, R Tan, AD Frankel… - Structural Tools for …, 1992 - Birkhauser Verlag Berlin

Design, synthesis, and biological activity of a cyclic peptide: An inhibitor of HIV-1 tat–TAR interactions in human cells

N Tamilarasu, I Huq, TM Rana - Bioorganic & Medicinal Chemistry Letters, 2000 - Elsevier
Replication of human immunodeficiency virus type 1 (HIV-1) requires specific interactions of
Tat protein with the trans-activation responsive region (TAR) RNA, a 59-base stem-loop …

[HTML][HTML] Face-time with TAR: Portraits of an HIV-1 RNA with diverse modes of effector recognition relevant for drug discovery

SS Chavali, R Bonn-Breach, JE Wedekind - Journal of Biological Chemistry, 2019 - ASBMB
Small molecules and short peptides that potently and selectively bind RNA are rare, making
the molecular structures of these complexes highly exceptional. Accordingly, several recent …

A cyclic mimic of HIV Tat differentiates similar TAR RNAs on the basis of distinct dynamic behaviors

J Lu, L Nguyen, L Zhao, T Xia, X Qi - Biochemistry, 2015 - ACS Publications
Efforts toward the development of RNA-based drug leads have been challenging because of
the complexity and dynamic nature of RNA structures as therapeutic targets. The …

Development of small molecules with a noncanonical binding mode to HIV-1 trans activation response (TAR) RNA

FA Abulwerdi, MD Shortridge… - Journal of medicinal …, 2016 - ACS Publications
Small molecules that bind to RNA potently and specifically are relatively rare. The study of
molecules that bind to the HIV-1 transactivation response (TAR) hairpin, a cis-acting HIV …

[引用][C] Specific recognition of HIV-1 TAR RNA by a D-Tat peptide

I Huq, X Wang, TM Rana - Nature Structural Biology, 1997 - nature.com
Sir-The Tat protein of human immunodeficiency virus type-I (HIV-1) binds to its target RNA,
TAR, and activates transcription. A 36 amino acid peptide, Tat (37-72), containing RNA …

Artificial nucleobase–amino acid conjugates: a new class of TAR RNA binding agents

JP Joly, G Mata, P Eldin, L Briant… - … A European Journal, 2014 - Wiley Online Library
The human immunodeficiency virus type‐1 (HIV‐1) Tat protein stimulates transcriptional
elongation. Tat is involved in the transcription machinery by binding to the transactivation …