A comparative binding study of modified bovine immunodeficiency virus TAR RNA against its TAT peptide
Besides generating novel binding peptides or small molecules to their RNA target,
successful design of chemically modified RNA constructs capable of tighter binding with …
successful design of chemically modified RNA constructs capable of tighter binding with …
Detailed mutational analysis of TAR RNA: critical spacing between the bulge and loop recognition domains
B Berkhout, KT Jeang - Nucleic acids research, 1991 - academic.oup.com
Trans-activation of HIV-1 by the Tat protein is mediated through a cis-acting element (TAR)
in the viral RNA. In order to obtain further insight into the molecular interactions for trans …
in the viral RNA. In order to obtain further insight into the molecular interactions for trans …
Polyamide Amino Acids trimers as TAR RNA ligands and anti-HIV agents
V Bonnard, L Pascale, S Azoulay, A Di Giorgio… - Bioorganic & medicinal …, 2010 - Elsevier
Based on a split-and-mix strategy, a library of trimeric Polyamide Amino Acids (PAA)
incorporating four different amino acids (Lys, Ala, Arg, and Phe) has been prepared …
incorporating four different amino acids (Lys, Ala, Arg, and Phe) has been prepared …
TAR-RNA recognition by a novel cyclic aminoglycoside analogue
D Raghunathan, VM Sánchez-Pedregal… - Nucleic acids …, 2006 - academic.oup.com
The formation of the Tat-protein/TAR-RNA complex is a crucial step in the regulation of
human immunodeficiency virus (HIV)-gene expression. To obtain full-length viral transcripts …
human immunodeficiency virus (HIV)-gene expression. To obtain full-length viral transcripts …
A single intermolecular contact mediates intramolecular stabilization of both RNA and protein
V Calabro, MD Daugherty… - Proceedings of the …, 2005 - National Acad Sciences
An arginine-rich peptide from the Jembrana disease virus (JDV) Tat protein is a structural
“chameleon” that binds bovine immunodeficiency virus (BIV) or HIV TAR RNAs in two …
“chameleon” that binds bovine immunodeficiency virus (BIV) or HIV TAR RNAs in two …
Aminoglycoside− arginine conjugates that bind TAR RNA: synthesis, characterization, and antiviral activity
A Litovchick, AG Evdokimov, A Lapidot - Biochemistry, 2000 - ACS Publications
Regulation of HIV gene expression is crucially dependent on binding of the trans-activator
protein, Tat, to the trans-activation response RNA element, TAR, found at the 5 'end of all …
protein, Tat, to the trans-activation response RNA element, TAR, found at the 5 'end of all …
Fragment based search for small molecule inhibitors of HIV-1 Tat-TAR
M Zeiger, S Stark, E Kalden, B Ackermann… - Bioorganic & Medicinal …, 2014 - Elsevier
Basic molecular building blocks such as benzene rings, amidines, guanidines, and amino
groups have been combined in a systematic way to generate ligand candidates for HIV-1 …
groups have been combined in a systematic way to generate ligand candidates for HIV-1 …
Identification of a novel HIV-1 TAR RNA bulge binding protein
B Baker, M Muckenthaler, E Vives… - Nucleic acids …, 1994 - academic.oup.com
The Tat protein binds to TAR RNA to stimulate the expression of the human
immunodeficiency virus type 1 (HIV-1) genome. Tat is an 86 amino acid protein that contains …
immunodeficiency virus type 1 (HIV-1) genome. Tat is an 86 amino acid protein that contains …
How binding of small molecule and peptide ligands to HIV-1 TAR alters the RNA motional landscape
MF Bardaro Jr, Z Shajani… - Nucleic acids …, 2009 - academic.oup.com
Abstract The HIV-1 TAR RNA represents a well-known paradigm to study the role of
dynamics and conformational change in RNA function. This regulatory RNA changes …
dynamics and conformational change in RNA function. This regulatory RNA changes …
Click dimers to target HIV TAR RNA conformation
A series of neomycin dimers have been synthesized using “click chemistry” with varying
functionality and length in the linker region to target the human immunodeficiency virus type …
functionality and length in the linker region to target the human immunodeficiency virus type …