Plant and soil drivers of whole-plant microbiomes: variation in switchgrass fungi from coastal to mountain sites

MR Lee, CV Hawkes - Phytobiomes Journal, 2021 - Am Phytopath Society
Plant-associated microbial diversity is regulated by dispersal from local and regional
species pools, as well as filtering by the environment and plant host. However, few studies …

Foliar fungal endophyte communities are structured by environment but not host ecotype in Panicum virgatum (switchgrass)

BK Whitaker, HL Reynolds, K Clay - Ecology, 2018 - Wiley Online Library
Experimental tests of community assembly mechanisms for host‐associated microbiomes in
nature are lacking. Asymptomatic foliar fungal endophytes are a major component of the …

[HTML][HTML] Host genotype controls ecological change in the leaf fungal microbiome

A VanWallendael, GMN Benucci, PB da Costa… - PLoS …, 2022 - journals.plos.org
Leaf fungal microbiomes can be fundamental drivers of host plant success, as they contain
pathogens that devastate crop plants and taxa that enhance nutrient uptake, discourage …

Plant compartment and genetic variation drive microbiome composition in switchgrass roots

E Singer, J Bonnette, SC Kenaley… - Environmental …, 2019 - Wiley Online Library
Switchgrass (Panicum virgatum) is a promising biofuel crop native to the United States with
genotypes that are adapted to a wide range of distinct ecosystems. Various plants have …

Intraspecific variability in root traits and edaphic conditions influence soil microbiomes across 12 switchgrass cultivars

TC Ulbrich, ML Friesen, SS Roley… - Phytobiomes …, 2021 - Am Phytopath Society
Microbial communities help plants access nutrients and tolerate stress. Some microbiomes
are specific to plant genotypes and, therefore, may contribute to intraspecific differences in …

[HTML][HTML] Protist diversity and community complexity in the rhizosphere of switchgrass are dynamic as plants develop

JA Ceja-Navarro, Y Wang, D Ning, A Arellano… - Microbiome, 2021 - Springer
Background Despite their widespread distribution and ecological importance, protists
remain one of the least understood components of the soil and rhizosphere microbiome …

Seasonal dynamics of core fungi in the switchgrass phyllosphere, and co-occurrence with leaf bacteria

AW Bowsher, GMN Benucci, G Bonito… - Phytobiomes …, 2021 - Am Phytopath Society
Plant leaves harbor complex microbial communities that influence plant health and
productivity. Nevertheless, a detailed understanding of phyllosphere community assembly …

The switchgrass microbiome: a review of structure, function, and taxonomic distribution

R Hestrin, MR Lee, BK Whitaker… - Phytobiomes …, 2021 - Am Phytopath Society
Switchgrass (Panicum virgatum L.) has been championed as a promising bioenergy crop
due to its high productivity across a wide environmental range. The switchgrass microbiome …

[HTML][HTML] Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range

JA Edwards, UB Saran, J Bonnette, A MacQueen, J Yin… - Current Biology, 2023 - cell.com
A fundamental goal in plant microbiome research is to determine the relative impacts of host
and environmental effects on root microbiota composition, particularly how host genotype …

Local plants, not soils, are the primary source of foliar fungal community assembly in a C4 grass

BK Whitaker, H Giauque, C Timmerman, N Birk… - Microbial ecology, 2022 - Springer
Microbial communities, like their macro-organismal counterparts, assemble from multiple
source populations and by processes acting at multiple spatial scales. However, the relative …