Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli

MZ Qayyum, V Molodtsov, A Renda… - Journal of Biological …, 2021 - ASBMB
After transcription termination, cellular RNA polymerases (RNAPs) are occasionally trapped
on DNA, impounded in an undefined post-termination complex (PTC), limiting the free RNAP …

[PDF][PDF] Elongation/termination factor exchange mediated by PP1 phosphatase orchestrates transcription termination

T Kecman, K Kuś, DH Heo, K Duckett, A Birot… - Cell reports, 2018 - cell.com
Termination of RNA polymerase II (Pol II) transcription is a key step that is important for 3′
end formation of functional mRNA, mRNA release, and Pol II recycling. Even so, the …

Functional dissection of RNA polymerase III termination using a peptide nucleic acid as a transcriptional roadblock

E Guffanti, R Corradini, S Ottonello, G Dieci - Journal of Biological …, 2004 - ASBMB
We have shown previously that a T 10 peptide nucleic acid (PNA) bound to the
transcriptional terminator of a Saccharomyces cerevisiae tDNA Ile (TAT) gene arrests …

A novel tandem reporter quantifies RNA polymerase II termination in mammalian cells

A Banerjee, MC Sammarco, S Ditch, J Wang… - PLoS …, 2009 - journals.plos.org
Background Making the correct choice between transcription elongation and transcription
termination is essential to the function of RNA polymerase II, and fundamental to gene …

Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine

H Hou, Y Li, M Wang, A Liu, Z Yu, K Chen… - Nature …, 2021 - nature.com
Termination of the RNA polymerase III (Pol III)-mediated transcription requires the
conversion of an elongation complex (EC) to a pre-termination complex (PTC) on poly …

Conserved residues in yeast initiator tRNA calibrate initiation accuracy by regulating preinitiation complex stability at the start codon

J Dong, A Munoz, SE Kolitz, AK Saini… - Genes & …, 2014 - genesdev.cshlp.org
Eukaryotic initiator tRNA (tRNAi) contains several highly conserved unique sequence
features, but their importance in accurate start codon selection was unknown. Here we show …

Trigger loop dynamics mediate the balance between the transcriptional fidelity and speed of RNA polymerase II

MH Larson, J Zhou, CD Kaplan… - Proceedings of the …, 2012 - National Acad Sciences
During transcription, RNA polymerase II (RNAPII) must select the correct nucleotide,
catalyze its addition to the growing RNA transcript, and move stepwise along the DNA until a …

RNA polymerase III mutants in TFIIFα-like C37 that cause terminator readthrough with no decrease in transcription output

K Rijal, RJ Maraia - Nucleic acids research, 2013 - academic.oup.com
How eukaryotic RNA polymerases switch from elongation to termination is unknown. Pol III
subunits Rpc53 and Rpc37 (C53/37) form a heterodimer homologous to TFIIFβ/α. C53/37 …

Efficient termination of transcription by RNA polymerase I requires the 5′ exonuclease Rat1 in yeast

A El Hage, M Koper, J Kufel… - Genes & …, 2008 - genesdev.cshlp.org
During transcription termination by RNA polymerase II on protein-coding genes, the nuclear
5′ exonuclease Rat1/Xrn2 degrades the nascent transcript downstream from the …

cis- and trans-Acting Determinants of Transcription Termination by Yeast RNA Polymerase II

EJ Steinmetz, SBH Ng, JP Cloute… - Molecular and cellular …, 2006 - Taylor & Francis
Most eukaryotic genes are transcribed by RNA polymerase II (Pol II), including those that
produce mRNAs and many noncoding functional RNAs. Proper expression of these genes …