Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S
H Guan, P Wang, P Zhang, C Ruan, Y Ou, B Peng… - Nature, 2023 - nature.com
Context-dependent dynamic histone modifications constitute a key epigenetic mechanism in
gene regulation,,–. The Rpd3 small (Rpd3S) complex recognizes histone H3 trimethylation …
gene regulation,,–. The Rpd3 small (Rpd3S) complex recognizes histone H3 trimethylation …
Set2 methylation of histone H3 lysine 36 suppresses histone exchange on transcribed genes
S Venkatesh, M Smolle, H Li, MM Gogol, M Saint… - Nature, 2012 - nature.com
Set2-mediated methylation of histone H3 at Lys 36 (H3K36me) is a co-transcriptional event
that is necessary for the activation of the Rpd3S histone deacetylase complex, thereby …
that is necessary for the activation of the Rpd3S histone deacetylase complex, thereby …
Multivalent di‐nucleosome recognition enables the Rpd3S histone deacetylase complex to tolerate decreased H3K36 methylation levels
JW Huh, J Wu, CH Lee, M Yun, D Gilada… - The EMBO …, 2012 - embopress.org
The Rpd3S histone deacetylase complex represses cryptic transcription initiation within
coding regions by maintaining the hypo‐acetylated state of transcribed chromatin. Rpd3S …
coding regions by maintaining the hypo‐acetylated state of transcribed chromatin. Rpd3S …
Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin
Nucleosomes must be deacetylated behind elongating RNA polymerase II to prevent cryptic
initiation of transcription within the coding region. RNA polymerase II signals for …
initiation of transcription within the coding region. RNA polymerase II signals for …
Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex
In Saccharomyces cerevisiae, cryptic transcription at the coding region is prevented by the
activity of Sin3 histone deacetylase (HDAC) complex Rpd3S, which is carried by the …
activity of Sin3 histone deacetylase (HDAC) complex Rpd3S, which is carried by the …
Nucleosome contact triggers conformational changes of Rpd3S driving high-affinity H3K36me nucleosome engagement
The Rpd3S histone deacetylase complex utilizes two subunits, Eaf3 and Rco1, to recognize
nucleosomes methylated at H3K36 (H3K36me) with high affinity and strong specificity …
nucleosomes methylated at H3K36 (H3K36me) with high affinity and strong specificity …
[HTML][HTML] Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S
C Xu, G Cui, MV Botuyan, G Mer - Structure, 2008 - cell.com
Deacetylation of nucleosomes by the Rpd3S histone deacetylase along the path of
transcribing RNA polymerase II regulates access to DNA, contributing to faithful gene …
transcribing RNA polymerase II regulates access to DNA, contributing to faithful gene …
[PDF][PDF] Chromatin remodelers fine-tune H3K36me-directed deacetylation of neighbor nucleosomes by Rpd3S
Chromatin remodelers have been implicated in the regulation of histone-modifying
complexes. However, the underlying mechanism remains poorly understood. The Rpd3S …
complexes. However, the underlying mechanism remains poorly understood. The Rpd3S …
Histone H3 lysine 36 dimethylation (H3K36me2) is sufficient to recruit the Rpd3s histone deacetylase complex and to repress spurious transcription
Histone methylation is associated with both transcription activation and repression.
However, the functions of different states of methylation remain largely elusive. Here, using …
However, the functions of different states of methylation remain largely elusive. Here, using …
Genome-wide binding map of the histone deacetylase Rpd3 in yeast
SK Kurdistani, D Robyr, S Tavazoie, M Grunstein - Nature genetics, 2002 - nature.com
We describe the genome-wide distribution of the histone deacetylase and repressor Rpd3
and its associated proteins Ume1 and Ume6 in Saccharomyces cerevisiae. Using a new …
and its associated proteins Ume1 and Ume6 in Saccharomyces cerevisiae. Using a new …