Heavy atom containing fluorescent ribonucleoside analog probe for the fluorescence detection of RNA-ligand binding

MG Pawar, A Nuthanakanti… - Bioconjugate Chemistry, 2013 - ACS Publications
Although numerous biophysical tools have provided effective systems to study nucleic acids,
our current knowledge on how RNA structure complements its function is limited. Therefore …

Excimer-FRET Cascade in Dual DNA Probes: Open Access to Large Stokes Shift, Enhanced Acceptor Light up, and Robust RNA Sensing

IO Aparin, OV Sergeeva, AS Mishin… - Analytical …, 2020 - ACS Publications
The efficacy of fluorescent hybridization assays is often limited by the low signal-to-
background ratio of the probes that can be partially overcome by sophisticated signal …

Dual fluorophore PNA FIT-probes− extremely responsive and bright hybridization probes for the sensitive detection of DNA and RNA

E Socher, A Knoll, O Seitz - Organic & biomolecular chemistry, 2012 - pubs.rsc.org
Fluorescently labeled oligonucleotides are commonly employed as probes to detect specific
DNA or RNA sequences in homogeneous solution. Useful probes should experience strong …

Fluorescent PNA probes as hybridization labels for biological RNA

KL Robertson, L Yu, BA Armitage, AJ Lopez… - Biochemistry, 2006 - ACS Publications
Fluorescent labeling of biological RNA is complicated by the narrow range of nucleoside
triphosphates that can be used for biological synthesis (ie, transcription) as well as the …

Rational design of self-quenched rhodamine dimers as fluorogenic aptamer probes for live-cell RNA imaging

KT Fam, R Pelletier, F Bouhedda… - Analytical …, 2022 - ACS Publications
With the growing interest in the understanding of the importance of RNAs in health and
disease, detection of RNAs in living cells is of high importance. Fluorogenic dyes that light …

[引用][C] Development of thiazole orange-carrying peptide nucleic acid small molecule conjugate probes for the promoter region of Influenza A virus

CU Okeke - Tohoku University

FRET enabled real time detection of RNA-small molecule binding

Y Xie, AV Dix, Y Tor - Journal of the American Chemical Society, 2009 - ACS Publications
A robust analysis and discovery platform for antibiotics targeting the bacterial rRNA A-site
has been developed by incorporating a new emissive U surrogate into the RNA and labeling …

Site-specific dual-color labeling of long RNAs for single-molecule spectroscopy

M Zhao, FD Steffen, R Börner, MF Schaffer… - Nucleic Acids …, 2018 - academic.oup.com
Labeling of long RNA molecules in a site-specific yet generally applicable manner is integral
to many spectroscopic applications. Here we present a novel covalent labeling approach …

[PDF][PDF] Tetramolecular fluorescence complementation for detection of specific RNAs in vitro

SJ Kellermann, AK Rath, A Rentmeister - ChemBioChem, 2013 - ziel.uni-luebeck.de
Asymmetrically localized RNA has been found in many cell types and organisms and
contributes to important developmental processes, such as mating type switching in yeast,[1] …

Small-molecule based Proximity Labeling for RNA Localization Studies

H Jia, L Li, J Han, J Liang, Y Li - RNA Biology (05/12/2022-09/12/2022 …, 2022 - hub.hku.hk
Cellular activities rely on the coordination among various biomolecules. Over the years,
proximity labeling methods have becoming more and more important and popular thanks to …